PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1122080.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 416aa MW: 44818.8 Da PI: 7.6594

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1122080.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.4	2.5e-31	193	246	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hv+SHLQ+YR+ Pd.00g1122080.m01 193 PRMRWTTSLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVRSHLQMYRT 246 8****************************************************7 PP
2	Myb_DNA-binding	49.2	1.2e-15	194	245	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl +++s++q+y+ Pd.00g1122080.m01 194 RMRWTTSLHNRFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVRSHLQMYR 245 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MRATSESAEW IFLATVLGLE MLSAACDQAS SPRRPHYALY GMLLAIAAVL ISIWELIYKG 60 KREGVVLRRW GMLWWFYHPP PPRHTPFGTL PDIYGLVAGI SQCICSIIQY VYCLRHADNP 120 IKASILPAIF LICLGGSKLG KNQRNANTTD NNILRKPLDS NSSTPTSTIT STSSSSPLFQ 180 AQGGLLRSRW RYPRMRWTTS LHNRFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVRSH 240 LQMYRTVKTA DRAAAFSGQS DVHENASSVD ATEDIIFYLQ KPRRSGDQLL SAQTIHVQDN 300 KDSWENSSSM GETSLHAIGA NIQSLDDQEW EQQRLQQAGA RATEGAATAE LGAGVEATEV 360 GVRAVAAAAA AKAGAGAAAA AAAVAVEEAG AGATAAAEVA ARAATAAEAE MKASYY

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MRATSESAEW IFLATVLGLE MLSAACDQAS SPRRPHYALY GMLLAIAAVL ISIWELIYKG  60
KREGVVLRRW GMLWWFYHPP PPRHTPFGTL PDIYGLVAGI SQCICSIIQY VYCLRHADNP  120
IKASILPAIF LICLGGSKLG KNQRNANTTD NNILRKPLDS NSSTPTSTIT STSSSSPLFQ  180
AQGGLLRSRW RYPRMRWTTS LHNRFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVRSH  240
LQMYRTVKTA DRAAAFSGQS DVHENASSVD ATEDIIFYLQ KPRRSGDQLL SAQTIHVQDN  300
KDSWENSSSM GETSLHAIGA NIQSLDDQEW EQQRLQQAGA RATEGAATAE LGAGVEATEV  360
GVRAVAAAAA AKAGAGAAAA AAAVAVEEAG AGATAAAEVA ARAATAAEAE MKASYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-44	G2-like family protein