PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1121570.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 161aa MW: 17332.3 Da PI: 4.4676 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 77.8 | 1.6e-24 | 38 | 120 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W +e+++Li++r e+e r ++ +k+ k+lWe+vs+km+ergf+r+p+qCk+kw+nl ryk ++++ + s ++cp+f++l+ Pd.00g1121570.m01 38 QWAPEETRELIAIRGELEIRNSNlAKRSKALWEAVSSKMAERGFNRTPEQCKCKWKNLLIRYKGKETSDPE----SGRECPFFEELQ 120 7*****************9988768999************************************9999997....4667******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MYGAGGDEEE GMGMGMGSGG AGLMKKMMTS PAGGGSGQWA PEETRELIAI RGELEIRNSN 60 LAKRSKALWE AVSSKMAERG FNRTPEQCKC KWKNLLIRYK GKETSDPESG RECPFFEELQ 120 AVFTERANNM QRLLLESETA AEDGDGVEGN DGEAGTGAAD V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38250.1 | 6e-30 | Trihelix family protein |