PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1108850.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 142aa    MW: 15920.2 Da    PI: 4.9106
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1108850.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.32.1e-1132115696
                        ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SSSEE..EEEE CS
                 B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgrsefelvvkv 96 
                        t+ +  ++ +lv+  kf ++      +s   t+ + +g+ W++ +   ++s++  l  +Wk F+ +n+Lk+gD +vFk l+  s+++lv++v
  Pd.00g1108850.m01  32 TKTNIERLYQLVVLGKFSATLP---SCS-VPTVLTFRGKNWDMIY--HGSSSHKRLD-NWKAFAIDNNLKVGDACVFKqLEC-SSTRLVFRV 115
                        5555555555666666654442...233.34677889********..8888877787.********************5444.555555443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MGDLPTSNPV IELEGDEFWP LSGKPFFDVV LTKTNIERLY QLVVLGKFSA TLPSCSVPTV  60
LTFRGKNWDM IYHGSSSHKR LDNWKAFAID NNLKVGDACV FKQLECSSTR LVFRVQILRG  120
DIPSEFLDKL DGDNADAPIV LE