PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1105610.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 856aa    MW: 96076.5 Da    PI: 5.9906
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1105610.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS289.21.1e-884918542374
               GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                         + Ll++Ae v  +++e+a++lL r + +a  +g+p+qR+++yf+eAL++r+ r++ ++ ++ +  + s  +  ++   + ++++  P++ +
  Pd.00g1105610.m02 491 AHILLAAAEKVGYQQFERANRLLLRCEWIAYFKGNPVQRVVFYFAEALRERIERETGSIPSKAKEMSISG-HGLSTNPTYIAYHQEVPFHSV 581
                        699***************************************************6666666555555543.3444445556799999***** PP

               GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                         ++t  qaI e+v+ e++vH iD++i  G+QW  L+++La+R+e p   l iT+vg+     k+++eetg+rL+++Ae+l++pf+f++++ +
  Pd.00g1105610.m02 582 MQFTGIQAIIESVSLESKVHLIDLEIRSGVQWTGLMESLAEREECPVeLLTITAVGE---AGKQKIEETGKRLTSVAESLNIPFQFKAVIIS 670
                        *******************************************7666489*******...589***************************** PP

               GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        ++ed++ + ++v+ +Ea+aV   l l ++ +++ +le+    +++++++l P ++vv+e ea+hns+sF++rf++al yysa+fd+le+ + 
  Pd.00g1105610.m02 671 AMEDIKDQLFDVEDDEAVAVYAPLILRTMISRPSCLEN----LMRVMRNLTPCIMVVIEVEANHNSPSFVNRFIDALFYYSAFFDCLETCV- 757
                        ******************************88888888....************************************************7. PP

               GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                        +++e r+ +E   +++ i+n+va+eg+er++r  ++  Wr+ + ++G+ ++++s+    qa+l+ ++++    +++ + ++l+ gWk+ p+ 
  Pd.00g1105610.m02 758 KQEEYRVLMEDL-FREGIRNIVAAEGSERVARSVKMDVWRAFFARFGMVEMNFSNASLYQASLVAKRFGCPSCTLDRNGKCLIVGWKGTPIH 848
                        556667777766.********************************************************999******************** PP

               GRAS 369 svSaWr 374
                        svSaW+
  Pd.00g1105610.m02 849 SVSAWK 854
                        *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 856 aa     Download sequence    
MSFQNYLDWE QRAKKLLMSL TSFLKQPFHT LTITLLSLLL PLSFLLLARL SCANSLLSLS  60
FTPLHPDPNY STTTTSSTLF SLLRYATPSL LYILVSIVST AAFIHCLTGK ITIITEFPTP  120
TFRPRLYTAW IFLCTLQVCV GLGIEGSIAS GINGATLSGV DERICLLSRA IFFLGLHETM  180
LHWCRVVVKP VVDDTVFGAA RGEKWVERVA VAASFGCIWW WRLRDEVESL VVVAKAKREL  240
SMGIGVADFV GWWLYYLTVT IGMVRVVKGV MWLSMVLLCR RRSGGGNFAN SCAEDRDLQD  300
NKNMANAFFP FTPFDFGVLG GLTPQLEDYE KDQEVAFKVK RGHLFAIEEL GLGEMDSALS  360
SEHGFYQEDT QPIQDGTHQF TYNQIGGSDI AETNKDLPHQ SSLAVLELLN SYGSAFKKLR  420
GERTSSNTGN EAEASSYVGQ QKLSTEEIMR VAGARYVQFS NQGYGDFYPL HPFGYALSGL  480
SEEETKDAEL AHILLAAAEK VGYQQFERAN RLLLRCEWIA YFKGNPVQRV VFYFAEALRE  540
RIERETGSIP SKAKEMSISG HGLSTNPTYI AYHQEVPFHS VMQFTGIQAI IESVSLESKV  600
HLIDLEIRSG VQWTGLMESL AEREECPVEL LTITAVGEAG KQKIEETGKR LTSVAESLNI  660
PFQFKAVIIS AMEDIKDQLF DVEDDEAVAV YAPLILRTMI SRPSCLENLM RVMRNLTPCI  720
MVVIEVEANH NSPSFVNRFI DALFYYSAFF DCLETCVKQE EYRVLMEDLF REGIRNIVAA  780
EGSERVARSV KMDVWRAFFA RFGMVEMNFS NASLYQASLV AKRFGCPSCT LDRNGKCLIV  840
GWKGTPIHSV SAWKFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.14e-50GRAS family protein