PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1103540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 295aa    MW: 33763.5 Da    PI: 4.3626
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1103540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.91.9e-2361371128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk...sgyWk 84 
                        +p+G+rF P++eel+ +yL ++v+g++ +   v++++d+y + ePw++ +    +  ++++++y F++ +kk+++g+r  r++    +g+Wk
  Pd.00g1103540.m01   6 VPVGYRFTPSEEELLLHYLLPRVNGNDYPK-GVVPDCDLYGTkEPWEIWRdfhhSSPNDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVWK 96 
                        599************************999.99*******9879****643333333366688******************643344999** PP

                NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                           + k++ +  g+++g++k + + +  +p+    +W+m e++l
  Pd.00g1103540.m01  97 GEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137
                        *********9.999***********655555..89*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MGGYQVPVGY RFTPSEEELL LHYLLPRVNG NDYPKGVVPD CDLYGTKEPW EIWRDFHHSS  60
PNDQEDIYVF TTLKKKTPNG SRFCRTVGAA GTGVWKGEDS GKKIRACGND IGIRKRFRYM  120
NPGSPHDDRW IMLEFQLDES LVQVPNKETI VLCLVRKKET SGKSKLEEQQ NHEVDMASRG  180
EIQAQHVHDD QQQHIDASTY DQLRFLDDYL MNDVEGEQNT MVNPSLLAQY DQQDMIGAST  240
EDQLKALEDF LMNDVEGEQD TMVDPALLAQ YGQQGTSIED QLRLFEDYLM SDIEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.12e-21NAC family protein