PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1103530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 254aa    MW: 29348.9 Da    PI: 4.9817
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1103530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.26.7e-2361371128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgy 82 
                        +p+G+rF+P++eel+ +yL ++v+g++ +   v++++d+y + ePw++ +    +  +  +++++y F++ +kk+++g+r  r++    +g+
  Pd.00g1103530.m01   6 VPVGYRFRPSEEELLLHYLFPRVNGNDYPK-GVVPDCDLYGAkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGV 94 
                        599************************999.99*******8769****7423322..24355688******************643344999 PP

                NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        Wk   + k++ +  g ++g++k + + +  +p+    +W+m e++l
  Pd.00g1103530.m01  95 WKGEDSGKKIRA-CGIDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137
                        ***********9.9*************655555..89*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MGGYQVPVGY RFRPSEEELL LHYLFPRVNG NDYPKGVVPD CDLYGAKEPW EIWRDFHHSS  60
PDDQEDIYVF TTLKKKTPNG SRFCRTVGAA GTGVWKGEDS GKKIRACGID IGIRKRFRYM  120
NPGSPHDDRW IMLEFQLDES LVRVRNKETI VLCLVRKKET SGKSKLEERQ THEVDMPSRG  180
EIQAQHVHDD QQQHIDASTY DQLRVLEDFL MNDVEGEQDT MVNPALLAQY GQQGTSIEDQ  240
LRFFEDYLMS DIEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.12e-22NAC family protein