PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1103350.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 246aa MW: 28107.4 Da PI: 4.3437 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 34.1 | 8.2e-11 | 11 | 88 | 51 | 128 |
NAM 51 vkaeekewyfFskrdkkyatgkrknratk...sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++++++y F++ +kk+++g+r r++ +g+Wk + k++ + g+++g++k + + + +p+ +W+m e++l Pd.00g1103350.m01 11 ITSDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVWKGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 88 45677899******************643344999***********9.999***********655555..89*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MGDMERFPPL ITSDQEDIYV FTTLKKKTPN GSRFCRTVGA AGTGVWKGED SGKKIRACGN 60 DIGIRKRFRY MNPGSPHDDR WIMLEFQLDE SLVQVPNKET IVLCLVRKKE TSGKSKLEER 120 QNHEVDMASR EEIQAQHVHD DQQQHIDAST YDQLRFLDDY LMNDVGGEQN TMVNPSLLAQ 180 YDQQDMIGSS TEDQLRVLED FLMNDVEGEQ DTMVNPALLA QYGQQGTSIE DQLKFLEDYL 240 MSDIEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61910.1 | 2e-10 | NAC family protein |