PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1100430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 166aa    MW: 18747.8 Da    PI: 5.2918
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1100430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB176.52.6e-5558154197
              NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 
                        vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yre
  Pd.00g1100430.m01  58 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRE 149
                        69****************************************************************************************** PP

              NF-YB  93 legek 97 
                        +ege+
  Pd.00g1100430.m01 150 MEGER 154
                        ***97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MRLAEMNQFS LQQGGKSTSS STTNININNV VSNNNNNVNH STSSNGTTTT TDDNECVVRE  60
QDRFMPIANV IRIMRKILPP HAKISDDAKE TIQECVSEYI SFITGEANER CQREQRKTIT  120
AEDVLWAMSK LGFDDYIEPL TLYLHRYREM EGERGSGSST TSVMRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.21e-62NF-YB family protein