PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g109960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 249aa MW: 28038.2 Da PI: 8.5918 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 109.2 | 1.9e-34 | 94 | 151 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCts+ C+vkk+vers +dp++v++tYeg+H+h+ Pd.00g109960.m01 94 EDGYRWRKYGQKAVKNSPFPRSYYRCTSTACNVKKRVERSFNDPSIVVTTYEGQHTHP 151 8********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MDVKKDVVKM EDNSTNIGYT IYPATPNSSS ISSASSEALN EEQTENKGAA DQDEEEEHDQ 60 PKTKKELKAK KASQKRQREP RFAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT 120 STACNVKKRV ERSFNDPSIV VTTYEGQHTH PSPLIPRPTL TASASVQPNI STTFAMPSMP 180 RTLLSHHYQH QLQPFNFCNY VNGGSPTANA SSTGFHHERR FCTPATGSAM LTDHGLLQDI 240 VPSHMLKQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 1e-60 | WRKY family protein |