PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1095990.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 519aa MW: 57988.5 Da PI: 4.6291

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1095990.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	74.7	2.2e-23	62	198	13	128
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk......................kvkaeekewyfFskrdkkyatgkrknratksgy 82 +l +++Lk+ ++gk + i+e+d+yk+ePwdL + + w+ Fs+ + kya++ r nrat +g+ Pd.00g1095990.m01 62 QLFCRFLKRMMQGKASQS---IPEIDVYKYEPWDLAGnpliclnfsslpiftfpralfpDSPYQPRAWFSFSRPEYKYANSPRCNRATGKGF 150 68899******99666...**********8458899999999999888877663344788********************** PP NAM 83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 Wk tgk ++v+s+ ++++ k+tL+f++gr +k+++t Wv +ey l Pd.00g1095990.m01 151 WKITGKPRQVKSRqlPKSVTCKKRTLTFHEGRVSKSRNTGWVRQEYYL 198 ********866566677889********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MSRSMSTTEE SMLDLLPKFR FHPSEEEMVN LLKNKVEGQD SQTMPDEIVD KPWDLPDNES 60 IQLFCRFLKR MMQGKASQSI PEIDVYKYEP WDLAGNPLIC LNFSSLPIFT FPRALFPDSP 120 YQPRAWFSFS RPEYKYANSP RCNRATGKGF WKITGKPRQV KSRQLPKSVT CKKRTLTFHE 180 GRVSKSRNTG WVRQEYYLTP TDPGSNPNQL SGFVLCRMKN KSTDSDNESD NKKQQDVSIC 240 VESADPGIAG CMASNSELDQ AAGIHLIPES EEHLTHKELE HVLLGSGNQN DGEPGGFVSS 300 DFDDMIQELC AKGGECLDSP SPPERPHQHQ LPQLGNVPVT GDYIGSNSNN QAAAIHHMIP 360 QPEDFLAYKE LEHVLGTCNP DASEPGGCVS SNMLQKQWQL CAQLGEELDS PIPPPGPPEL 420 GNAPYVYTDE CSSWPSPIGD NDSSLPNKNS IPTNYDSKPV SNTASNFENQ TRISEVYSQA 480 EENLESFFRQ FELEGDFLHA NNYIGCNESQ SATLFPQIS

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MSRSMSTTEE SMLDLLPKFR FHPSEEEMVN LLKNKVEGQD SQTMPDEIVD KPWDLPDNES  60
IQLFCRFLKR MMQGKASQSI PEIDVYKYEP WDLAGNPLIC LNFSSLPIFT FPRALFPDSP  120
YQPRAWFSFS RPEYKYANSP RCNRATGKGF WKITGKPRQV KSRQLPKSVT CKKRTLTFHE  180
GRVSKSRNTG WVRQEYYLTP TDPGSNPNQL SGFVLCRMKN KSTDSDNESD NKKQQDVSIC  240
VESADPGIAG CMASNSELDQ AAGIHLIPES EEHLTHKELE HVLLGSGNQN DGEPGGFVSS  300
DFDDMIQELC AKGGECLDSP SPPERPHQHQ LPQLGNVPVT GDYIGSNSNN QAAAIHHMIP  360
QPEDFLAYKE LEHVLGTCNP DASEPGGCVS SNMLQKQWQL CAQLGEELDS PIPPPGPPEL  420
GNAPYVYTDE CSSWPSPIGD NDSSLPNKNS IPTNYDSKPV SNTASNFENQ TRISEVYSQA  480
EENLESFFRQ FELEGDFLHA NNYIGCNESQ SATLFPQIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-26	NAC family protein