PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1092010.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 496aa MW: 53959.9 Da PI: 8.2689 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.1 | 2.8e-15 | 174 | 233 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g Pd.00g1092010.m01 174 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 233 57*******************666664477446*************************98 PP | |||||||
2 | AP2 | 47.3 | 5.1e-15 | 276 | 327 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g1092010.m01 276 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 327 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 496 aa Download sequence |
MDSSPQNWLL GFSLSNHSHH RHPSHDLSLF EAFASSPSHT SAHQQQDHSN PGGATPPPPT 60 DLSIFSSGVG GPKLEDFLGG STATPTSLAH FSGTTAAADH HHNHQQTAPL ALSESEIYDS 120 ELKTIAASFL RGFSTPATAS ATSVQTTKPQ NLVPLASSEL TPKKTADTFG QRTSIYRGVT 180 RHRWTGRYEA HLWDNSCRRE GQSRKGRQVY LGGYDKEEKA ARAYDLAALK YWGPTTTTNF 240 PVSHYEKELN EMKNMTRQEF VASLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN 300 KDLYLGTFST QEEAAEAYDI AAIKFRGLNA VTNFDMTRYD VKSIANSNLP IGGMSGKSKN 360 SSDSDGKSIE GNRSADDRDL SSASSVTFAS QQPSSSTLSF AIPIKQDPST DYWSNIFGYH 420 HNAKNPSTVS VAPSSLFQSC TTNVPYGNNS SQIPFNMDFS VSATSSTSLS ETNNGNNGFE 480 TTSGYGSNSN LQEDNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-151 | AP2 family protein |