PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1090930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 300aa MW: 33538.2 Da PI: 8.7245

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1090930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.6	2.5e-32	20	73	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++F++a+e+LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ Pd.00g1090930.m01 20 PRLRWTPELHHCFLHAIERLGGHKKATPKLVLQLMDVKGLTISHVKSHLQMYRS 73 8****************************************************7 PP
2	Myb_DNA-binding	50.4	5.3e-16	21	72	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +++a+++lGg+ t+k++ + m kg+t ++ks++q+y+ Pd.00g1090930.m01 21 RLRWTPELHHCFLHAIERLGGHkkaTPKLVLQLMDvKGLTISHVKSHLQMYR 72 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MTSCSARNGA VRQYVRSKVP RLRWTPELHH CFLHAIERLG GHKKATPKLV LQLMDVKGLT 60 ISHVKSHLQM YRSMRSDLGT RQQVTDRSCT QPRKQSFEEH DDGCLDEVNG VSFYPSSKSI 120 RESDSQLIYS TPRRSKRARA ETRSSISEGL QQQCSQGIYE TISNPYSFDD NVLAMAQQQH 180 GGIKEPNPSA LSLPQPHLHY NFNQPSQFSL QESDFFKVTK PEARADADQD NEDGDCQLSL 240 SLSLHHPSSH KSKSNASSSE FSGAISSYSS SRSNYKDCST SSSVNHRSIN LNLSIALCGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	5e-32	G2-like family protein