PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1087750.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 279aa MW: 31651.5 Da PI: 5.7513 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+d+vk +G g+W + +r+ g++R++k+c++rw++yl Pd.00g1087750.m01 14 KGAWTALEDQILIDYVKDHGEGRWGKLSRETGLKRCGKSCRLRWLNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++ Pd.00g1087750.m01 67 RGNITEDEEDLIIRLHKLLGNR-WALIAGRLP-GRTDNEIKNYWNSV 111 7999******************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MGRSYRCDKD GLSKGAWTAL EDQILIDYVK DHGEGRWGKL SRETGLKRCG KSCRLRWLNY 60 LRPEIKRGNI TEDEEDLIIR LHKLLGNRWA LIAGRLPGRT DNEIKNYWNS VLRKKAQESH 120 SERSRNEWKT TKDTEKAVPS LKMDSHFIQN GLTPTSCINN EQLGTTNTLA EPFTSGVEAT 180 NMEVKSDSSD GFLPIAREND MTWNFIRDLN AGELGISEFL HTDFSKLCEL NTTIFDCTSG 240 CRNRSLMSTS TAEAPLNLQE WLNDWAADDN CLPEAAFGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 4e-56 | MYB family protein |