PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1085450.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

LBD

Protein Properties

Length: 229aa MW: 25781.8 Da PI: 4.2693

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1085450.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	92.6	4.6e-29	8	109	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 +C aCk+l+++C+k+C++apyf +e+ +f +h +FGas+++++l+ lp +e a ++++ A+ara dP+yG+v+ il+lq+++ + + Pd.00g1085450.m01 8 PCGACKFLKKRCKKGCIFAPYFMHEEaIMDFSSIHNVFGASKMSRILSMLPISECAVASWTMTFDAHARAVDPIYGCVSYILDLQEHVLNIQ 99 7*******************9998469*********************************************************** PP DUF260 92 aelallkeel 101 a+l++++e+l Pd.00g1085450.m01 100 AQLDEAHEQL 109 ***99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MSSRTFNPCG ACKFLKKRCK KGCIFAPYFM HEEAIMDFSS IHNVFGASKM SRILSMLPIS 60 ECAVASWTMT FDAHARAVDP IYGCVSYILD LQEHVLNIQA QLDEAHEQLA RAVAPVANPN 120 QDLENSNEQS EVANPTEQAA VAKPTEFESL PQFSFTYTNN VDNENMNLNY HVSGSYKNTV 180 NIPTENVLDG WVNNEGTSSM SFFDMEWSFE DVDELLVDPW FSTYISNIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	3e-41	LBD family protein