PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1081620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 516aa    MW: 58557.7 Da    PI: 6.7989
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1081620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS362.94.6e-111774641365
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn......sseelaal..... 81 
                        +++lL++cAe +s+ d++ a++l++ ls  +sp gd+++Rl++ f++AL+ rl++  ++ ++al++ +t+  +             l     
  Pd.00g1081620.m01  77 MRQLLITCAELISQLDFSSARRLISLLSSKSSPFGDSTERLTHQFVKALSLRLNNPNPSSSAALTTAATAVASsssnylL------Leeedd 162
                        589****************************************************9999888887777765542233440......245555 PP

               GRAS  82 ..........klfsevsPilkfshltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp........egppslRiTgvgspesgs 154
                                   ++++++P+++fshltaNqaIlea++++ + +Hi+Dfdi++G+QWp+L+qaLa+R+        ++pp+lRiT+ g+    s
  Pd.00g1081620.m01 163 nneealhscyLTLNQITPFIRFSHLTANQAILEAIDSShHSIHILDFDIMHGVQWPPLMQALAERSynsdrtvqHPPPMLRITATGH----S 250
                        555555554345************************99899*************************766666655699*********....9 PP

               GRAS 155 keeleetgerLakfAeelgvpfefnvl....vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvv 242
                           l +tg+rL kfA++lg+ f+f++l    +++  + +++++L + p+EalaVn+vl lh+l+ ++       + +L+ +ksl+Pkv++++
  Pd.00g1081620.m01 251 LALLLKTGDRLLKFANSLGLAFHFHPLvlndAVRPSDIISPSTLGLLPNEALAVNCVLYLHTLVTDDSREL---SLFLRKIKSLNPKVLTIA 339
                        9**************************666666678999************************95555544...59**************** PP

               GRAS 243 eqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlek.WrerleeaGFkpvplseka 333
                        ++ea+hn++ F++rf+eale+y a+fdslea+lp++s+er+ vE +++grei++vv +e+ +rr+rhe++e+ W+ +l++aGF++v+ls +a
  Pd.00g1081620.m01 340 NKEANHNHPLFFNRFVEALEHYGAVFDSLEATLPPNSRERQAVEDVWMGREIRDVVGAEEGRRRQRHEKYETyWEVMLRRAGFENVALSPFA 431
                        *********************************************************************9866******************* PP

               GRAS 334 akqaklllrkvk.sdgyrveeesgslvlgWkdr 365
                         +qaklllr ++ s+gy++   ++s++l  ++r
  Pd.00g1081620.m01 432 LSQAKLLLRLHYpSEGYQLRIINDSFFLALSSR 464
                        *******************99999999875555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
MLMGSFNSSH LQQQEEQVPL EDQQEDHPHH NYQLPNISNI SDLQLYHHNH HHLHAHQISH  60
QPFVMPRGLM TTSPTHMRQL LITCAELISQ LDFSSARRLI SLLSSKSSPF GDSTERLTHQ  120
FVKALSLRLN NPNPSSSAAL TTAATAVASS SSNYLLLEEE DDNNEEALHS CYLTLNQITP  180
FIRFSHLTAN QAILEAIDSS HHSIHILDFD IMHGVQWPPL MQALAERSYN SDRTVQHPPP  240
MLRITATGHS LALLLKTGDR LLKFANSLGL AFHFHPLVLN DAVRPSDIIS PSTLGLLPNE  300
ALAVNCVLYL HTLVTDDSRE LSLFLRKIKS LNPKVLTIAN KEANHNHPLF FNRFVEALEH  360
YGAVFDSLEA TLPPNSRERQ AVEDVWMGRE IRDVVGAEEG RRRQRHEKYE TYWEVMLRRA  420
GFENVALSPF ALSQAKLLLR LHYPSEGYQL RIINDSFFLA LSSRIYLWLS FDFAPFIALI  480
YAVCPLNNTI KVLKIDHFML SPCLLYHHTS LNSPAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-108GRAS family protein