PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1081220.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 1193aa MW: 131713 Da PI: 8.3557 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.5 | 2.4e-18 | 373 | 473 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ Pd.00g1081220.m01 373 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIKIQDVKGNEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-P 462 99**************************555556667***************9989999999***9.********************887.7 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++lv++++++ Pd.00g1081220.m01 463 GGRLVMGFRKA 473 77788877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1193 aa Download sequence |
MVSNIFYAGP WHCVYSRAAY EKLVYCDKFH AGESGWRDCS LCRKPLHCGC IVSKSLYECL 60 DYGGVGCISC AKSSQPRVIQ NDDVLNGFGG LKISNYSDRQ STVVQNGAFS NTVDEGKLLQ 120 LCKIMEANES NLLPQPQRGD INVSLVQKKQ EEVINHKGEV GLGFSSTTQP SIGSLTFSKS 180 DNGRTMIEDM NKSSSQPSLS MTLGSPSATP SFVQPFPGGL VDGREQSKTP SSFQQGHGRE 240 QGTTPSFQQG LVDGREQSKT SSSFQQGLVD GREQSKTPSS FQQGLVDGRE QSKTPSSFQQ 300 GQKSRPILPK PLKPGVTMSS ETNKGGFPNV RVARPPAEGR GKNQLLPRYW PRITDQELQK 360 LSGDLNSTIV PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQSEGLPI KIQDVKGNEW 420 MFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ AGDTVTFSRI DPGGRLVMGF RKASKSLDMQ 480 DPQTSILPNG STPGETSCPS VVENPATGSG HPGLFQTNTG SKDPHLHALS EHLHLTDGDM 540 SLHRNDYHGH RTSEDLLQQP VSNSDKKRAR NIGPKSKRLL MHSEDVLELR LTWEEAQDLL 600 RPPPSVKPSI VTIEDHEFEE YDEPPVFGKR SLFIASSSER QEQWAQCDDC SKWRRLPADV 660 LLPPKWTCSE NSWDTSRRLC SAPEEMSQKD FDSLLRASKD LKKRRIIENC TETQGHEPSG 720 LDALASAAIL GDNVVDSGEQ SVGATTRHPR HRPGCTCIVC IQPPSGKGKH KPTCTCNVCL 780 TVRRRFKTLM MRKKKRQSER EAENAQKDNN NHKDESEING TTTEVGLHMN HSSENGGCQS 840 RIEADVAESS TAGQIDLNCE PNPYVQASGL TLSRLADAVS QPLNNYMKES CLANMMSMGD 900 KATLAKARME LEDMYQGIPD ESVNLTFQDF AELKLNRIAS SEKKKPNPIL SESISELKYT 960 TQPSSPSPLT KLPSLDFNRA LQASSINHSH HHVDHAAGPT CHAGGGLRHG LETSMGAYDH 1020 DVSGISMASG VYNQQKDRGG RRRPGIPHSN ICTLCSTYIY IFRHRCLVCG RVYCRQCVML 1080 GMGDMTEGRK CVDCLGRRFS QRYIQRAGEV GCFSRYPLIV KQAELKWAEK GPRRSGGNNG 1140 STMMSPRSRS SMTPVTPRTP NRAHNTSSSP NSFVMNSSSY SPYSPTHRHH LPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 783 | 794 | RRRFKTLMMRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 0.0 | B3 family protein |