PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1081100.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 940aa MW: 103362 Da PI: 6.9526

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1081100.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58	1.8e-18	373	473	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ Pd.00g1081100.m01 373 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIKIQDVKGNEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-P 462 99************************555556667***********99899999999.*******************887.7 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++lv++++++ Pd.00g1081100.m01 463 GGRLVMGFRKA 473 77788877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 940 aa Download sequence
MVSNIFYAGP WHCVYSRAAY EKLVYCDKFH AGESGWRDCS LCRKPLHCGC IVSKSLYECL 60 DYGGVGCISC AKSSQPRVIQ NDDVLNGFGG LKISNYSDRQ STVVQNGAFS NTVDEGKLLQ 120 LCKIMEANES NLLPQPQRGD INVSLVQKKQ EEVINHKGEV GLGFSSTTQP SIGSLTFSKS 180 DNGRTMIEDM NKSSSQPSLS MTLGSPSATP SFVQPFPGGL VDGREQSKTP SSFQQGHGRE 240 QGTTPSFQQG LVDGREQSKT SSSFQQGLVD GREQSKTPSS FQQGLVDGRE QSKTPSSFQQ 300 GQKSRPILPK PLKPGVTMSS ETNKGGFPNV RVARPPAEGR GKNQLLPRYW PRITDQELQK 360 LSGDLNSTIV PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQSEGLPI KIQDVKGNEW 420 MFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ AGDTVTFSRI DPGGRLVMGF RKASKSLDMQ 480 DPQTSILPNG STPGETSCPS VVENPATGSG HPGLFQTNTG SKDPHLHALS EHLHLTDGDM 540 SLHRNDYHGH RTSEDLLQQP VSNSDKKRAR NIGPKSKRLL MHSEDVLELR LTWEEAQDLL 600 RPPPSVKPSI VTIEDHEFEE YDEPPVFGKR SLFIASSSER QEQWAQCDDC SKWRRLPADV 660 LLPPKWTCSE NSWDTSRRLC SAPEEMSQKD FDSLLRASKD LKKRRIIENC TETQGHEPSG 720 LDALASAAIL GDNVVDSGEQ SVGATTRHPR HRPGCTCIVC IQPPSGKGKH KPTCTCNVCL 780 TVRRRFKTLM MRKKKRQSER EAENAQKDNN NHKDESEING TTTEVGLHMN HSSENGGCQS 840 RIEADVAESS TAGQIDLNCE PNPYVQASGL TLSRLADAVS QPLNNYMKES CLANMMCEQQ 900 AGIGSSLLTQ ATDESERRLS NEGCLSAVAA WDCEGRGDAD

Sequence ? help Back to Top

Protein Sequence Length: 940 aa Download sequence

MVSNIFYAGP WHCVYSRAAY EKLVYCDKFH AGESGWRDCS LCRKPLHCGC IVSKSLYECL  60
DYGGVGCISC AKSSQPRVIQ NDDVLNGFGG LKISNYSDRQ STVVQNGAFS NTVDEGKLLQ  120
LCKIMEANES NLLPQPQRGD INVSLVQKKQ EEVINHKGEV GLGFSSTTQP SIGSLTFSKS  180
DNGRTMIEDM NKSSSQPSLS MTLGSPSATP SFVQPFPGGL VDGREQSKTP SSFQQGHGRE  240
QGTTPSFQQG LVDGREQSKT SSSFQQGLVD GREQSKTPSS FQQGLVDGRE QSKTPSSFQQ  300
GQKSRPILPK PLKPGVTMSS ETNKGGFPNV RVARPPAEGR GKNQLLPRYW PRITDQELQK  360
LSGDLNSTIV PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQSEGLPI KIQDVKGNEW  420
MFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ AGDTVTFSRI DPGGRLVMGF RKASKSLDMQ  480
DPQTSILPNG STPGETSCPS VVENPATGSG HPGLFQTNTG SKDPHLHALS EHLHLTDGDM  540
SLHRNDYHGH RTSEDLLQQP VSNSDKKRAR NIGPKSKRLL MHSEDVLELR LTWEEAQDLL  600
RPPPSVKPSI VTIEDHEFEE YDEPPVFGKR SLFIASSSER QEQWAQCDDC SKWRRLPADV  660
LLPPKWTCSE NSWDTSRRLC SAPEEMSQKD FDSLLRASKD LKKRRIIENC TETQGHEPSG  720
LDALASAAIL GDNVVDSGEQ SVGATTRHPR HRPGCTCIVC IQPPSGKGKH KPTCTCNVCL  780
TVRRRFKTLM MRKKKRQSER EAENAQKDNN NHKDESEING TTTEVGLHMN HSSENGGCQS  840
RIEADVAESS TAGQIDLNCE PNPYVQASGL TLSRLADAVS QPLNNYMKES CLANMMCEQQ  900
AGIGSSLLTQ ATDESERRLS NEGCLSAVAA WDCEGRGDAD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	783	794	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein