PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1079520.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 330aa MW: 37611.2 Da PI: 4.8875 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 70.7 | 3.8e-22 | 10 | 141 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkat 86 +GfrFhPtd+el++++L kk+ +k+ + ++++++++ + ++ePw + ++++yfFs+ ++ +++g+r +r + + g+W++ Pd.00g1079520.m01 10 VGFRFHPTDQELISYFLYKKAVAKEplmASYSNIVHDFNlLGETEPWVVWDifgGPDLIDEDLYFFSELKNLSPNGSRIKRkIEAGGTWSEA 101 7*******************888886765556679999725689***9964233223356799******************5555899**99 PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++k +++g+ +g kk L + + + ++ +W+++ey+l Pd.00g1079520.m01 102 FSKKVYDETTGNPIGRKKNLRYEN--EGCEHHGKWLLEEYSL 141 8865555559999********983..4444589*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MTNYSGNRLV GFRFHPTDQE LISYFLYKKA VAKEPLMASY SNIVHDFNLL GETEPWVVWD 60 IFGGPDLIDE DLYFFSELKN LSPNGSRIKR KIEAGGTWSE AFSKKVYDET TGNPIGRKKN 120 LRYENEGCEH HGKWLLEEYS LVDQETQKIV LCRLKKNNRV WNKINNSTQE LKEKPSNKKA 180 RKGLGLPRIK MEDEEPHRTS GLSSVYNNLD QELIIDTNYN AISNNICGDN QHNMLMTSDF 240 ASDPVCFDYG GLTDEEYVFD VNELLASVEP QPLSLELPQM AETLEPLLSS GLGDDRAVEA 300 WNSSGLENIY ATNKKTSHIG STVKKYFENL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 9e-16 | NAC family protein |