PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1079290.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 424aa MW: 47049.6 Da PI: 7.8364 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.4 | 1.4e-17 | 160 | 206 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l+++vkq+G + W+ Ia+++ gR +kqc++rw+++l Pd.00g1079290.m01 160 KGQWTDEEDRKLIRLVKQYGVRKWAQIAEKLV-GRAGKQCRERWHNHL 206 799*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 57.2 | 3.8e-18 | 212 | 254 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ +lv+a+++ G++ W+ Ia++++ gRt++ +k++w+ Pd.00g1079290.m01 212 KDSWTEEEEMILVEAHTEVGNR-WAEIAKRIP-GRTENAIKNHWN 254 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MEGEGGGEEG GGGYGVYGLI NNTQPHHPHH HHQNMHRPGP PLTAIDRFLW GSQSNFSHQN 60 NASSKENVVS TNGLFGFSSF GGAIGHEASC WPSYGAGGQY PQEVSFLDGL LGDHGEALMM 120 SWSGQAEQNP NTGFIEEAKV SERRVGKRAR KGLTAAALIK GQWTDEEDRK LIRLVKQYGV 180 RKWAQIAEKL VGRAGKQCRE RWHNHLRPDI KKDSWTEEEE MILVEAHTEV GNRWAEIAKR 240 IPGRTENAIK NHWNATKRRQ NSRRKNRQAE GKDGNNNNKP QSSILQNYIR SKNLMSNNNN 300 NNNNNNSSPN VSTISNNTPA SSSTLSHENP SKTHLNILAT EPSDQSTTSN CCDSPLNLAN 360 SSSSFSSTDH HHLGFYNTSM EYLMAHDQYH EASAAASSNE KREMDLIEMV SSSQFALGTS 420 RTSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58850.1 | 9e-59 | MYB family protein |