PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1077900.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 1312aa    MW: 148634 Da    PI: 6.5145
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1077900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS334.22.4e-1023356503320
               GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av+s d++ a++lL+++++++sp+gd+++Rla+yf+ +L+arla++ +  y+ l + +t+    +e l+a++l++  +P+ k+ 
  Pd.00g1077900.m01 335 TLLTQCAQAVASYDQRTASELLKQIRKHSSPYGDATERLAHYFADGLEARLAGTRTPSYSPLLSIQTP---AAEILKAYQLYVTHCPYKKML 423
                        69***************************************************999999999888888...8******************** PP

               GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        h+  N++I++ +e+++r+HiiDf+is+G+QWp+++q L++Rp+gpp++R+T+++  ++g   +e++eetg+rL k+A++++vpf+++v +a+
  Pd.00g1077900.m01 424 HFFSNRTIMKLAEKATRLHIIDFGISYGFQWPCFIQRLSKRPGGPPNIRMTAIELLQPGfrPTERVEETGRRLDKYAKRFNVPFQYKV-IAQ 514
                        *********************************************************9999**************************9.7** PP

               GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        ++e++++e+L+++++E ++Vn++++l++++de+v  +s+rd+vLkl+k+++P++ ++   +  +ns+ Fl+rf eal ++sa fd++ea++p
  Pd.00g1077900.m01 515 KWETIQFEDLKIDRDELIVVNCMHRLKHIPDETVMASSPRDTVLKLIKRINPDLYIHGVVNGAYNSPFFLTRFREALFHFSAQFDMFEATIP 606
                        ******************************************************************************************** PP

               GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerle 320
                        re+e+r + E++++g++i+nv+aceg er+er et+++W+  ++
  Pd.00g1077900.m01 607 REDEQRLMFEKAVFGKDIMNVIACEGLERVERPETYKQWQVVFS 650
                        ***************************************98875 PP
2GRAS377.91.3e-11593913082372
               GRAS    2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91  
                          +lL+ecA+av s d++ a++lL+++++++sp+g ++qR+a+yf+e+L+arla+  s  y+ l   +ts   ++e l+a+++++ ++P+ 
  Pd.00g1077900.m01  939 CKLLTECAQAVGSYDQQSASELLKQIRQHSSPYGYATQRVAHYFAEGLEARLAGARSLSYAPLLIMHTS---TTEILKAYQVYVSACPFK 1025
                         589***************************************************888888888888887...89**************** PP

               GRAS   92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179 
                         k+ h+ aN++I++ +e+++r+HiiDf+is+GlQWp+L+q+L+++++gpp+lRiT+++ p++g   +e++eetg+rLak+ ++ gvpfe+n
  Pd.00g1077900.m01 1026 KMLHFFANRTIMKQTEKATRLHIIDFGISYGLQWPCLIQSLSEKTGGPPNLRITAIEFPQPGfrPAERIEETGRRLAKYSKRYGVPFEYN 1115
                         *************************************************************9**************************** PP

               GRAS  180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269 
                         v +ak++e+++leeL+++++E+++Vn++++l++++de+v ++++rd+vL+l+k+++P+++ +   +  +n++ F++rf + l ++ alfd
  Pd.00g1077900.m01 1116 V-IAKKWETIRLEELQIDRNEVIVVNCMHRLKQIPDETVMMNNPRDAVLNLIKRINPDLFMHGVVNGTYNAPAFVTRFKQLLFHFHALFD 1204
                         9.7*************************************************************************************** PP

               GRAS  270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgsl 358 
                         ++ea++pr++e+r   Er+++gr+i+nv+aceg er+er et+++W++r  +aGFk++pl+ +  k++k++ ++++  + + +e++ +++
  Pd.00g1077900.m01 1205 MYEATVPRDDEHRLLFERAIFGRDIMNVIACEGLERVERPETYKQWQARYVRAGFKQLPLDRELLKKMKTMSKMMGyHKDFGIEDDGEWM 1294
                         ***************************************************************************99999********** PP

               GRAS  359 vlgWkdrpLvsvSa 372 
                         ++gWk+r ++++Sa
  Pd.00g1077900.m01 1295 LQGWKGRIIIALSA 1308
                         ************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1312 aa     Download sequence    
MDTLLERLSV TKEKFHFGHG SIPVHSNQNL VNGFQVNHEP TNPPFLPTNS DRPSDSSTSL  60
SSGSDGDAFD ISDCSQPVLK YISDILLEED LEGKPCMLQD CLALQAAEKS FYDVLNQKDP  120
PSPNQPPLSD HQSFENSDDD STHSCHRIND YGAEKTDWVF DSSETSHVQS SLVESPPDTL  180
LASDSLYGNF GGVGEARKLL PNENFGIIDL EKYQFMSQGP NTLFRNLASK RENDGYNSTN  240
ISKEKKNRQR EDGDYAEEGR SNKQSAAYAD DSEPQEMFDK VLLCSVNHES ESCSHDIPLK  300
NEGSGKLKPN KQSKGSKTAR SKKQNNKREV VDFSTLLTQC AQAVASYDQR TASELLKQIR  360
KHSSPYGDAT ERLAHYFADG LEARLAGTRT PSYSPLLSIQ TPAAEILKAY QLYVTHCPYK  420
KMLHFFSNRT IMKLAEKATR LHIIDFGISY GFQWPCFIQR LSKRPGGPPN IRMTAIELLQ  480
PGFRPTERVE ETGRRLDKYA KRFNVPFQYK VIAQKWETIQ FEDLKIDRDE LIVVNCMHRL  540
KHIPDETVMA SSPRDTVLKL IKRINPDLYI HGVVNGAYNS PFFLTRFREA LFHFSAQFDM  600
FEATIPREDE QRLMFEKAVF GKDIMNVIAC EGLERVERPE TYKQWQVVFS VLMEELNFGH  660
GSNSVSSDQN LVNGLQVNHE PTNKLLLPAN LDRPNDSSTS SEGDTVDSTD CNLPGLKYIS  720
DILLEEDLEG KPCMLEDILG LQAAEKSFYD ALNQKDPPLP NQPSSSVYQS FENSDGGFQS  780
SNGSISGFQS SNGSIAAKTG SVWDFSETSH VQTSLVELLS DTTLVSDSFS DTQSLGNFRG  840
IWHPCQRIMA TTQQMDQRER RIIKGRSNKQ SAAFADDSDL QEMFDKVLQG VNPESESCFH  900
DESLNAEGTR KLQHNKQSKG SKTTCSKKPN SNRQVVDLCK LLTECAQAVG SYDQQSASEL  960
LKQIRQHSSP YGYATQRVAH YFAEGLEARL AGARSLSYAP LLIMHTSTTE ILKAYQVYVS  1020
ACPFKKMLHF FANRTIMKQT EKATRLHIID FGISYGLQWP CLIQSLSEKT GGPPNLRITA  1080
IEFPQPGFRP AERIEETGRR LAKYSKRYGV PFEYNVIAKK WETIRLEELQ IDRNEVIVVN  1140
CMHRLKQIPD ETVMMNNPRD AVLNLIKRIN PDLFMHGVVN GTYNAPAFVT RFKQLLFHFH  1200
ALFDMYEATV PRDDEHRLLF ERAIFGRDIM NVIACEGLER VERPETYKQW QARYVRAGFK  1260
QLPLDRELLK KMKTMSKMMG YHKDFGIEDD GEWMLQGWKG RIIIALSALK PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-168GRAS family protein