PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1077870.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 698aa    MW: 79019.8 Da    PI: 6.2432
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1077870.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS385.94.6e-1183256962374
               GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                         +lL++cA+av+s d++ a++lL+++++++sp+gd++qRla+yf+ +L+arla+  +  y+ l   + s   ++e l+a+++f+  sP+ ++
  Pd.00g1077870.m01 325 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDANQRLAHYFADGLEARLAGARTPSYSFLFGMQIS---TAEILKAHEVFVTSSPFKTV 413
                        579***************************************************999999999888887...89****************** PP

               GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlva 183
                        sh++aN++Il+ +e+++r+H+iDf+is+G+QWp+++q L++Rp+gpp+lRiT+++ p++g   +e++eetg+rL+k+Ae+++vpfe+nv +a
  Pd.00g1077870.m01 414 SHFLANRTILKLAEKATRLHVIDFGISYGFQWPCFIQHLTKRPGGPPKLRITAIELPQPGfrPTERVEETGRRLKKYAERFNVPFEYNV-IA 504
                        ***********************************************************9****************************9.7* PP

               GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                        +++e++++e+L+++++E+++Vn++ +l++++de+v ++s+rd vLkl+k+++P+++++   +  +ns+ F++rf eal ++salfd +ea++
  Pd.00g1077870.m01 505 QKWETIQFEDLKIDRNEVIVVNCMNRLKHIPDETVMVNSPRDIVLKLIKKINPDLFIHGVVNGTYNSPFFVTRFREALFHFSALFDVFEASV 596
                        ******************************************************************************************** PP

               GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrp 366
                        pre+e r + E+ + g++i nvvaceg er+er et+++W+ r  +aGFk++p++++  k+++ +l+ ++  + +r++e+ +++++gWk+r+
  Pd.00g1077870.m01 597 PREDERRLMFEKYVYGKDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPVDQELLKKMRKMLKFMGyHNDFRIDEDGHWILQGWKGRT 688
                        *******************************************************************9999999****************** PP

               GRAS 367 LvsvSaWr 374
                        ++++S+W+
  Pd.00g1077870.m01 689 ILALSFWK 696
                        *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 698 aa     Download sequence    
MERFNFGHGS ASFYSNQNLV NGFQVNQEST GSVCLSTNLD HPSDSNTSLS SGSDGDTIDI  60
SEYNRPVIKY ISDILLEEDL EGKPCMLQDC LALQAAEKSF YDVLNQNDHP SPKQPPLPVH  120
QSFENSDDDS PHSCHSSNGS IAAKTDWVFD PSEASHVQSS LVQSLSDAGL VSDSLSEMQS  180
LGNFGGLGEA SKFLPNVTLE GYRLMPPGLD QWPSSTNILM TTPDNDGYNS TNGSKGKKNH  240
QREDADYPEE GRSNKQPVAF ADDSEPQEMF DEVLLCHGNH EFESCSPDES LITEGSGKLQ  300
RNKQKGSKTA RSKKQNNNWE LVDLSTLLTQ CAQAVASYDQ RTASELLKQI RQHSSPYGDA  360
NQRLAHYFAD GLEARLAGAR TPSYSFLFGM QISTAEILKA HEVFVTSSPF KTVSHFLANR  420
TILKLAEKAT RLHVIDFGIS YGFQWPCFIQ HLTKRPGGPP KLRITAIELP QPGFRPTERV  480
EETGRRLKKY AERFNVPFEY NVIAQKWETI QFEDLKIDRN EVIVVNCMNR LKHIPDETVM  540
VNSPRDIVLK LIKKINPDLF IHGVVNGTYN SPFFVTRFRE ALFHFSALFD VFEASVPRED  600
ERRLMFEKYV YGKDILNVVA CEGLERVERP ETYKQWQVRN VRAGFKQLPV DQELLKKMRK  660
MLKFMGYHND FRIDEDGHWI LQGWKGRTIL ALSFWKKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-176GRAS family protein