PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1077860.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 709aa    MW: 80163.8 Da    PI: 5.7918
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1077860.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS379.93.1e-1163367072374
               GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                         +lL++cA+av+s d++ a++lL+++++++sp+gd++qR a+yf+ +L+arla+  +  y+ l + + s    +e l+a++++   sP+ k+
  Pd.00g1077860.m01 336 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDATQRSAHYFADGLEARLAGARTPSYSPLVSMQIS---AAEILKAHEVYITSSPFKKM 424
                        579***************************************************999999999999998...9******************* PP

               GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlva 183
                        s+++aN++Il+ +e+++r+H+iDf+is+G+QWp++++ L++Rp+gpp+lRiT+++ p++g   +e++eetg+rL+k+Ae+++vpfe+nv +a
  Pd.00g1077860.m01 425 SNFLANRTILKLAEKATRLHVIDFGISYGFQWPCFIHRLSERPGGPPKLRITAIELPQPGfrPTERVEETGRRLEKYAERFNVPFEYNV-IA 515
                        ***********************************************************9****************************9.7* PP

               GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                        +++e++++e+Lr++++E ++Vn++ +l++++de+v ++s+rd vLkl+k+++P+++v+   +  +ns+ F++rf eal ++salfd++ea +
  Pd.00g1077860.m01 516 QKWETIQFEDLRIDRNELIVVNCMNRLKHIPDETVMVNSPRDIVLKLIKKINPDLFVHGVVNGTYNSPFFVTRFKEALFHFSALFDMFEACV 607
                        ******************************************************************************************** PP

               GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrp 366
                        p+e+e r   E+++ gr+i nvvaceg er+er et+++W+ r  +aGFk++pl+++  k++k++l+ ++  + +r++e+ +++++gWk+r 
  Pd.00g1077860.m01 608 PHEDERRLLFEKAVYGRDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPLDQELLKSVKRMLKFMGyHNDFRIDEDGHWMLQGWKGRI 699
                        *******************************************************************9999999****************** PP

               GRAS 367 LvsvSaWr 374
                          ++S+W+
  Pd.00g1077860.m01 700 TRALSFWK 707
                        *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    
MDTLLERYYL SMERFNFGHG SASLDSNQNL VNGFQVNQES TSPVRLSTNL DHPSDSSTSL  60
SSGSDGDTID FSDYNHPVLK YVSDILLEED LEGKTCMLQD CLALQAAEKS FYDVLNQEDP  120
PSPNQLPPSV HQSFENSDDD SPHSCHRSNG SIAANTDLVF DPSETSNVQS SLVQSLSDAG  180
LVSDSLSEMH SLGHSGGLGE ASKFLPNVKL EGNRLMPPGL DQWPSSTNIL MTTPDNDGYN  240
STNGSKGKKN HQREDADYPE EGRSNKQPVA FADDSEPQEM FDEVLLCHGN HEFESCSPDE  300
SLITEGSGKL QRNKQKGSKT ARSKKQNNNW ELVDLSTLLT QCAQAVASYD QRTASELLKQ  360
IRQHSSPYGD ATQRSAHYFA DGLEARLAGA RTPSYSPLVS MQISAAEILK AHEVYITSSP  420
FKKMSNFLAN RTILKLAEKA TRLHVIDFGI SYGFQWPCFI HRLSERPGGP PKLRITAIEL  480
PQPGFRPTER VEETGRRLEK YAERFNVPFE YNVIAQKWET IQFEDLRIDR NELIVVNCMN  540
RLKHIPDETV MVNSPRDIVL KLIKKINPDL FVHGVVNGTY NSPFFVTRFK EALFHFSALF  600
DMFEACVPHE DERRLLFEKA VYGRDILNVV ACEGLERVER PETYKQWQVR NVRAGFKQLP  660
LDQELLKSVK RMLKFMGYHN DFRIDEDGHW MLQGWKGRIT RALSFWKKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein