PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1077850.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 775aa    MW: 87142.5 Da    PI: 4.84
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1077850.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS367.51.9e-1123987721373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++lL+ cA+avss+d++ +++lL+++++++spdgd  qRla++f++AL+ar+a++ +++     + ++++++++++l+a+++   ++P+ +
  Pd.00g1077850.m01 398 LRNLLILCAQAVSSNDFRTTSELLKQVRQHSSPDGDGSQRLAHFFANALEARMAGTDTGTRMFYVSLASKRTSVVDTLKAYQVSLSACPFKR 489
                        6899***************************************************777777777888888888******************* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        +s +  N++Il+ +e+++++Hi+Df+i +G+QWp L+q L++Rp+gpp+lRiTg++ p++g   ++ +eetg+rLak++e+++vpfe+n+++
  Pd.00g1077850.m01 490 ISTFFKNKMILKMAEKATTLHIVDFGILYGFQWPILIQHLSKRPGGPPKLRITGIEVPQPGfrPADWIEETGRRLAKYCERFNVPFEYNAIA 581
                        ************************************************************9*9****************************9 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        ++++e+++le+L+++++E+laVn++l+ ++llde+v+++ +rd+vLkl+++++P+++v++  + ++n++ F++rf eal ++sal+d+++ +
  Pd.00g1077850.m01 582 SQNWESIKLEDLKTERNEVLAVNCMLRFKNLLDETVEVNCPRDSVLKLIRRMKPDIFVHTIVNGSYNAPFFVTRFREALFHFSALYDAFDIN 673
                        99****************************************************************************************** PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        ++r++eer k Ere+ gre++nv+aceg er+er et+++W+ r ++aG++p+pl++++ k  k  +r  + + + ++++s+++++gWk+r 
  Pd.00g1077850.m01 674 IARDNEERLKFEREFYGREAMNVIACEGLERVERPETYKQWQLRCTRAGLRPLPLDQDMLKIFKDKVRAWYHKDFVIDQDSDWMLQGWKGRI 765
                        ***********************************************************************888****************** PP

               GRAS 367 LvsvSaW 373
                        +++ S+W
  Pd.00g1077850.m01 766 VYASSCW 772
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 775 aa     Download sequence    
MDPTINGVPD YTNGFNIDAE PFLPNSTQFP NLINEYQFNQ LSPDLNFLDN HFSLPSPDLE  60
PGNFVPSISV SSDGESFVPS TSLSPDGVSF APPLTTVSPG GDSSSDDNDY SETVFKFINQ  120
ILMEENIEKK PCMFYDPLGL RDTEKSFYDA LGQKYPSSSP NQQPLYIDQN VESPDGNFSG  180
NCSDCSGSNS NSTASPGTSN SVDPPWLGDP VDQKPFLSQT SLPNDRTFQF NSHPNSQLSV  240
PLTNDLTSVG DELHVDNALQ GSSVNEFLAQ NIFTDSESIL QFNRGLEEAS KFLPKDNQLV  300
INLESNTTKN HERGDVAPEE ERSSKQSAVY IQESELSEMF DRVLLCTGGN NESPCDNVAL  360
QNEASQALQP SGHPQESNGN GGKARAKKQG KKKETVDLRN LLILCAQAVS SNDFRTTSEL  420
LKQVRQHSSP DGDGSQRLAH FFANALEARM AGTDTGTRMF YVSLASKRTS VVDTLKAYQV  480
SLSACPFKRI STFFKNKMIL KMAEKATTLH IVDFGILYGF QWPILIQHLS KRPGGPPKLR  540
ITGIEVPQPG FRPADWIEET GRRLAKYCER FNVPFEYNAI ASQNWESIKL EDLKTERNEV  600
LAVNCMLRFK NLLDETVEVN CPRDSVLKLI RRMKPDIFVH TIVNGSYNAP FFVTRFREAL  660
FHFSALYDAF DINIARDNEE RLKFEREFYG REAMNVIACE GLERVERPET YKQWQLRCTR  720
AGLRPLPLDQ DMLKIFKDKV RAWYHKDFVI DQDSDWMLQG WKGRIVYASS CWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein