PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g107770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 448aa    MW: 50469.2 Da    PI: 5.075
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g107770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS310.83.1e-95644453374
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       +lL+ecA+avs++d +++++lL+ l+elasp+gd  q+la+yf++AL  + ++s+ ++yk+l++ ++++++ +++ +    f+evsP+ +f+h
  Pd.00g107770.m01  64 RLLMECARAVSEKDSSKINHLLWMLNELASPYGDCEQKLASYFLQALFCKATDSGLRCYKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGH 156
                       79************************************************************9999985554444444445************ PP

              GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrle 187
                       ++ N aIlea++ge+++HiiD++ + ++QWp+Ll++La+R++++p+l++T+v+  ++  k  ++e+g+r++kfA+ +gvpfe+nv+   ++l 
  Pd.00g107770.m01 157 VASNGAILEALDGETKLHIIDISNTLCTQWPTLLESLATRNDETPHLKLTVVVT-ANIVKSVMKEIGQRMEKFARLMGVPFEINVIsGLNNLG 248
                       ******************************************************.66799*************************95567*** PP

              GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nse...sFlerflealeyysalfdsleaklp 276
                       +l+ e+L v+++Ea+aVn++ +l r+      +e+ r +v+++++sl+P+vv+vve+ead+ +s+   +F++ f e+l++y+  fd+le+++ 
  Pd.00g107770.m01 249 ELTKEDLGVQEDEAIAVNCIGALRRIE-----VEE-RGAVIRMFQSLRPRVVTVVEEEADLfSSSvnhDFVKCFEECLRFYTLYFDMLEESFV 335
                       **************************7.....444.88********************99965546669************************ PP

              GRAS 277 reseerikvErellgreivnvvacegaerr........erhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.....ee.. 354
                       ++s+er ++Ere  +r+iv v+ c + ++         er+e+ ++W+erl+ea F+p  +s+++++++k+ll+++   g+ +      e+  
  Pd.00g107770.m01 336 PTSNERLMLERE-CSRSIVRVLGCDHHDHDdkngggecERRERGSQWSERLKEA-FSPFGFSDDVVDDVKALLKRYR-AGWALVlppqgEDid 425
                       ************.89*********9887643334444489************98.**********************.666666556663254 PP

              GRAS 355 sgslvlgWkdrpLvsvSaWr 374
                       +  ++l+Wk++p+v++S W+
  Pd.00g107770.m01 426 QTGVYLTWKEEPVVWASIWK 445
                       77888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MDISLFSTNK EANFLQQYSN QIKINGLAAI DMQSTNQPQN SHTSTSRSSG SSEPCPAGTK  60
WASRLLMECA RAVSEKDSSK INHLLWMLNE LASPYGDCEQ KLASYFLQAL FCKATDSGLR  120
CYKTLTSVAE KSHSFDSARK LILKFQEVSP WTTFGHVASN GAILEALDGE TKLHIIDISN  180
TLCTQWPTLL ESLATRNDET PHLKLTVVVT ANIVKSVMKE IGQRMEKFAR LMGVPFEINV  240
ISGLNNLGEL TKEDLGVQED EAIAVNCIGA LRRIEVEERG AVIRMFQSLR PRVVTVVEEE  300
ADLFSSSVNH DFVKCFEECL RFYTLYFDML EESFVPTSNE RLMLERECSR SIVRVLGCDH  360
HDHDDKNGGG ECERRERGSQ WSERLKEAFS PFGFSDDVVD DVKALLKRYR AGWALVLPPQ  420
GEDIDQTGVY LTWKEEPVVW ASIWKPSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-142GRAS family protein