PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1074280.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 1128aa MW: 124419 Da PI: 8.5396

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1074280.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.6	2.3e-18	408	508	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ Pd.00g1074280.m01 408 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIKIQDVKGNEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-P 497 99************************555556667***********99899999999.*******************887.7 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++lv++++++ Pd.00g1074280.m01 498 GGRLVMGFRKA 508 77788877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1128 aa Download sequence
MDGVITSQVV FKIWVLQIWT KKGFAGVEFG IMGSKICMNV LCGTTNTHEW KKGWPLRSGG 60 FAHLCFKCGA AYEKLVYCDK FHAGESGWRD CSLCRKPLHC GCIVSKSLYE CLDYGGVGCI 120 SCAKSSQPRV IQNDDVLNGF GGLKISNYSD RQSTVVQNGA FSNTVDEGKL LQLCKIMEAN 180 ESNLLPQPQR GDINVSLVQK KQEEVINHKG EVGLGFSSTT QPSIGSLTFS KSDNGRTMIE 240 DMNKSSSQPS LSMTLGSPSA TPSFVQPFPG GLVDGREQSK TPSSFQQGHG REQGTTPSFQ 300 QGLVDGREQS KTSSSFQQGL VDGREQSKTP SSFQQGQKSR PILPKPLKPG VTMSSETNKG 360 GFPNVRVARP PAEGRGKNQL LPRYWPRITD QELQKLSGDL NSTIVPLFEK VLSASDAGRI 420 GRLVLPKACA EAYFPPISQS EGLPIKIQDV KGNEWMFQFR FWPNNNSRMY VLEGVTPCIQ 480 SMQLQAGDTV TFSRIDPGGR LVMGFRKASK SLDMQDPQTS ILPNGSTPGE TSCPSVVENP 540 ATGSGHPGLF QTNTGSKDPH LHALSEHLHL TDGDMSLHRN DYHGHRTSED LLQQPVSNSD 600 KKRARNIGPK SKRLLMHSED VLELRLTWEE AQDLLRPPPS VKPSIVTIED HEFEEYDEPP 660 VFGKRSLFIA SSSERQEQWA QCDDCSKWRR LPADVLLPPK WTCSENSWDT SRRLCSAPEE 720 MSQKDFDSLL RASKDLKKRR IIENCTETQG HEPSGLDALA SAAILGDNVV DSGEQSVGAT 780 TRHPRHRPGC TCIVCIQPPS GKGKHKPTCT CNVCLTVRRR FKTLMMRKKK RQSEREAENA 840 QKDNNNHKDE SEINGTTTEV GLHMNHSSEN GGCQSRIEAD VAESSTAGQI DLNCEPNPYV 900 QASGLTLSRL ADAVSQPLNN YMKESCLANM MSGPTCHAGG GLRHGLETSM GAYDHDVSGI 960 SMASGVYNQQ KDRGGRRRPG IPHSNICTLC STYIYIFRHR CLVCGRVYCR QCVMLGMGDM 1020 TEGRKCVDCL GRRFSQRYIQ RAGEVGCFSR YPLIVKQAEL KWAEKGPRRS GGNNGSTMMS 1080 PRSRSSMTPV TPRTPNRAHN TSSSPNSFVM NSSSYSPYSP THRHHLPF

Sequence ? help Back to Top

Protein Sequence Length: 1128 aa Download sequence

MDGVITSQVV FKIWVLQIWT KKGFAGVEFG IMGSKICMNV LCGTTNTHEW KKGWPLRSGG  60
FAHLCFKCGA AYEKLVYCDK FHAGESGWRD CSLCRKPLHC GCIVSKSLYE CLDYGGVGCI  120
SCAKSSQPRV IQNDDVLNGF GGLKISNYSD RQSTVVQNGA FSNTVDEGKL LQLCKIMEAN  180
ESNLLPQPQR GDINVSLVQK KQEEVINHKG EVGLGFSSTT QPSIGSLTFS KSDNGRTMIE  240
DMNKSSSQPS LSMTLGSPSA TPSFVQPFPG GLVDGREQSK TPSSFQQGHG REQGTTPSFQ  300
QGLVDGREQS KTSSSFQQGL VDGREQSKTP SSFQQGQKSR PILPKPLKPG VTMSSETNKG  360
GFPNVRVARP PAEGRGKNQL LPRYWPRITD QELQKLSGDL NSTIVPLFEK VLSASDAGRI  420
GRLVLPKACA EAYFPPISQS EGLPIKIQDV KGNEWMFQFR FWPNNNSRMY VLEGVTPCIQ  480
SMQLQAGDTV TFSRIDPGGR LVMGFRKASK SLDMQDPQTS ILPNGSTPGE TSCPSVVENP  540
ATGSGHPGLF QTNTGSKDPH LHALSEHLHL TDGDMSLHRN DYHGHRTSED LLQQPVSNSD  600
KKRARNIGPK SKRLLMHSED VLELRLTWEE AQDLLRPPPS VKPSIVTIED HEFEEYDEPP  660
VFGKRSLFIA SSSERQEQWA QCDDCSKWRR LPADVLLPPK WTCSENSWDT SRRLCSAPEE  720
MSQKDFDSLL RASKDLKKRR IIENCTETQG HEPSGLDALA SAAILGDNVV DSGEQSVGAT  780
TRHPRHRPGC TCIVCIQPPS GKGKHKPTCT CNVCLTVRRR FKTLMMRKKK RQSEREAENA  840
QKDNNNHKDE SEINGTTTEV GLHMNHSSEN GGCQSRIEAD VAESSTAGQI DLNCEPNPYV  900
QASGLTLSRL ADAVSQPLNN YMKESCLANM MSGPTCHAGG GLRHGLETSM GAYDHDVSGI  960
SMASGVYNQQ KDRGGRRRPG IPHSNICTLC STYIYIFRHR CLVCGRVYCR QCVMLGMGDM  1020
TEGRKCVDCL GRRFSQRYIQ RAGEVGCFSR YPLIVKQAEL KWAEKGPRRS GGNNGSTMMS  1080
PRSRSSMTPV TPRTPNRAHN TSSSPNSFVM NSSSYSPYSP THRHHLPF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	818	829	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein