PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1073030.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 692aa MW: 80209.9 Da PI: 6.1021

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1073030.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.4	1.8e-21	69	160	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 ++Y ++A++ GFs+rk++s+ s + g i+kr+fvC+++g++ +kk t +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel Pd.00g1073030.m02 69 EYYGNFARKNGFSIRKERSRLSPQLG-IYKRDFVCYRSGFAPVKKKPTGEHHRDRKSVRCGCDAKMYLSKEVvdgVSQWFVVQFSNVHNHEL 159 59******************8888.***************************************99867789***********9 PP FAR1 90 a 90 Pd.00g1073030.m02 160 L 160 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MTSPPSKNIW IRRQQCPCGD WKCYVTYEGD SEETSSITSQ LVKNDSTGSE AMVSPYVGMV 60 FKSDDDAFEY YGNFARKNGF SIRKERSRLS PQLGIYKRDF VCYRSGFAPV KKKPTGEHHR 120 DRKSVRCGCD AKMYLSKEVV DGVSQWFVVQ FSNVHNHELL EDDQVRLLPA YRKIHEADQE 180 RILLLSKAGF PIHRIVKVLE LEKGIQGGQL PFLERDVRNF VQNRKKVVQE NDALLTEKRE 240 NDTLELLEAC KGTKEADEDF VYDFTVDEND KVEHIAWSYG DSVHAYTMFG DAVYFDTSYQ 300 SITYGVLFGA WLGIDNHGRT IFFGCVLLQD ETPRSFSWAL QTFVRFMRGR CPQTILTDLD 360 PGLRDAIRSE LPGTKHVVSI WNILPKVSSW FSVSLGSRCA EFKSEFDVLY RVENTEDFEL 420 QWNQMISMFG LTTDKHIALL YSFRASWALS YMKGYFLACM ATTTYSKSVD AFLKGVFSAQ 480 TCLRSFFEQV GISANFQNQA RQEMQYMHIK TCIPIEEHVR SILTPFAFNA LQHELVLAMQ 540 YAVSEMSNGS YLVRHFKEID GERLVIWIPE EEQIHCSCKE FESSGLLCRH SLRVFVVKNY 600 FQLPDKYHLN RWRKESSLDF YDDHITRTSD DEWFQDYHCL TETLFTESSI TKERADYVRR 660 ELTTQLTRIL NEVRNMPECE GVAMDLTFSP TG

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MTSPPSKNIW IRRQQCPCGD WKCYVTYEGD SEETSSITSQ LVKNDSTGSE AMVSPYVGMV  60
FKSDDDAFEY YGNFARKNGF SIRKERSRLS PQLGIYKRDF VCYRSGFAPV KKKPTGEHHR  120
DRKSVRCGCD AKMYLSKEVV DGVSQWFVVQ FSNVHNHELL EDDQVRLLPA YRKIHEADQE  180
RILLLSKAGF PIHRIVKVLE LEKGIQGGQL PFLERDVRNF VQNRKKVVQE NDALLTEKRE  240
NDTLELLEAC KGTKEADEDF VYDFTVDEND KVEHIAWSYG DSVHAYTMFG DAVYFDTSYQ  300
SITYGVLFGA WLGIDNHGRT IFFGCVLLQD ETPRSFSWAL QTFVRFMRGR CPQTILTDLD  360
PGLRDAIRSE LPGTKHVVSI WNILPKVSSW FSVSLGSRCA EFKSEFDVLY RVENTEDFEL  420
QWNQMISMFG LTTDKHIALL YSFRASWALS YMKGYFLACM ATTTYSKSVD AFLKGVFSAQ  480
TCLRSFFEQV GISANFQNQA RQEMQYMHIK TCIPIEEHVR SILTPFAFNA LQHELVLAMQ  540
YAVSEMSNGS YLVRHFKEID GERLVIWIPE EEQIHCSCKE FESSGLLCRH SLRVFVVKNY  600
FQLPDKYHLN RWRKESSLDF YDDHITRTSD DEWFQDYHCL TETLFTESSI TKERADYVRR  660
ELTTQLTRIL NEVRNMPECE GVAMDLTFSP TG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein