PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1070760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 573aa    MW: 62932 Da    PI: 5.6797
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1070760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS321.71.5e-982165724374
               GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                        lL+++Ae +++g+ +laq +Larl+++ sp g+p+qR+a+yf+eAL+  l+   ++  ++ + s+    + + ++ a+k fse+sP+l+f++
  Pd.00g1070760.m01 216 LLFNAAELIETGNPALAQGILARLNHQLSPIGKPFQRAAFYFKEALQLLLHI-NTSSNSSNALSPF---SLIFKIGAYKSFSEISPVLQFAN 303
                        799*********************************************9998.3333333444444...49********************* PP

               GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                        +t+NqaIleaveg +rvH+iDfdi++G+QW++++q+ a R+ g+ps++iT++ s++++++ e+  t+e+L++fA+el+++fe +++  ++l+
  Pd.00g1070760.m01 304 FTCNQAILEAVEGFNRVHVIDFDIGYGGQWASFMQEVALRNCGAPSFKITAFISSSTHDEFEIGFTRENLKHFASELNLSFELELVSLEALN 395
                        ******************************************************9*9***************************97444444 PP

               GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                            + L ++  E +aV + l + ++ ++++sl+      L++vk+lsPk+vv  ++ +d+++ +F++++++al+ ys l++sl+a    + 
  Pd.00g1070760.m01 396 -SGSWGLPLHVSEGVAVAVNLPIGSFSNNPLSLTM----ALRFVKQLSPKIVVSLDRGSDRTDVPFAHQVIQALHSYSGLLESLDAV-NVNP 481
                        .4467776666777777777777888889999999....*********************************************665.3466 PP

               GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                        ++ +k+Er ll++ i+++v+ ++ +     ++   Wr  ++++GF+p+ +s+++++qa++l++++++ g+++e+++ slvl+W+++ L+sv+
  Pd.00g1070760.m01 482 DALQKIERYLLQPGIEKIVTGRHLS----PKRTPPWRTLFSSSGFSPLIFSNFTESQAECLVQRTPVGGFHIEKRQSSLVLCWQRKDLISVT 569
                        8999****************99998....9999*********************************************************** PP

               GRAS 372 aWr 374
                        +Wr
  Pd.00g1070760.m01 570 VWR 572
                        **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
MEDWDGVLSD SPGQEQSILR LIMSDIEDPS LGLNKLLQSG SGSDQQDLEF SAGFHDVVDQ  60
GGYDGFEPNT GNLVSNINVD PSLHATSGSD FAFSNSSPNV QSTNVRLGSS SSPSPMFSAS  120
MNHPFPASLS PGMFQQQQQH IGMDEKPQIF NPQMVMNQNQ AQFTQNPAMF MPLTYAQLQE  180
HHLLSPPPPK RLNSGGFGPN YPGQRAPFSN PGQELLLFNA AELIETGNPA LAQGILARLN  240
HQLSPIGKPF QRAAFYFKEA LQLLLHINTS SNSSNALSPF SLIFKIGAYK SFSEISPVLQ  300
FANFTCNQAI LEAVEGFNRV HVIDFDIGYG GQWASFMQEV ALRNCGAPSF KITAFISSST  360
HDEFEIGFTR ENLKHFASEL NLSFELELVS LEALNSGSWG LPLHVSEGVA VAVNLPIGSF  420
SNNPLSLTMA LRFVKQLSPK IVVSLDRGSD RTDVPFAHQV IQALHSYSGL LESLDAVNVN  480
PDALQKIERY LLQPGIEKIV TGRHLSPKRT PPWRTLFSSS GFSPLIFSNF TESQAECLVQ  540
RTPVGGFHIE KRQSSLVLCW QRKDLISVTV WRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-149GRAS family protein