PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1070030.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 950aa MW: 104931 Da PI: 6.1049

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1070030.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	94.2	2.1e-29	770	894	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkya..tgkrknratksgyWkatg 87 +rF+Pt+eelv +L++k + ++i+e+di+++ePwd p+ + ++ + ++fF++rd ky+ + r+n at++g+Wk+tg Pd.00g1070030.m01 770 YRFRPTEEELV-SHLRNKKLVD-----HIIPEIDICNHEPWDVPAlyeglftEPDSPYQGMFFFCPRDYKYSdnNYARTNSATARGFWKTTG 855 79*******.6666654433.....479**********64666543222344588******9434569999********* PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k++ +++ g + k+t++fy+gr p +kt+Wvm ey l Pd.00g1070030.m01 856 KERVIKA--GGSIVRKRTFIFYEGRVPPYNKTNWVMLEYCL 894 999988..67899************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 950 aa Download sequence
MALSRLRHPV ISRAPSLFRA RLLSSSTRSF TRTFSVQNST TLGDNTLSRP ATLSMLTGVQ 60 DKLSKLKPWT GVKYYSTADP LHVVLTMPAL SPTMSQGNIA KWKKKEGDKI EAGDILCEIE 120 TDKATVEFES LEEGFLAKIL IPEGSKDVPV GQPIAITVED ADDIQNLPAN VVGGSEVKED 180 IPPQQNVKKE DGVQDKSSVG INTSELPPHI LIEMPALSPT MSQGNIAKWK KKEGDKIEVG 240 DVICEIETDK ATVEFECLEE GYLAQILAPE GSKDIAVGQA IAVTVEDAAD LEIVKNAVFS 300 GSAVKEEKPI HQDTRDATRS EKTSVKRISP AAKLLITEHG LDTSSLKASG AHGTLLKGDV 360 LAAIKSGLGS TIVSSKEKTT PSAQVHPKTS APTSTESRSS KQTDSFEDFP NSQIRKVIAT 420 RLLESKQNIP HLYLSSDVIL DPLLSLRKDL KERHNVKVSV NDIVIKAVAV ALRNVPEANA 480 YWDAEKGEVF LCDSVDISIA VATEKGLMTP IVRNADQKTI SVISSEVKEL AEKARAGKLK 540 PNEFQGGTFS ISNLGMFPAS ILAVGRGNKV VEPVIGSDGI ERPAVVTKMN LTLSADHRVF 600 DGKVGGSFLS ALRSNFSEIR RLLFRPSQNR SSHGSNRHHS NVHNVQSPVA QIHHLQTIAP 660 HLTLEQCQQI LGTVGKEEVS QSQANFAAIP NPKLAQQRDF VLCRLRKNAD KNVTSICAVA 720 EPAYAELHGN SEECPQPEEL ELVFPALQLQ DNISEEMEFE IFRPAALYNY RFRPTEEELV 780 SHLRNKKLVD HIIPEIDICN HEPWDVPALY EGLFTEPDSP YQGMFFFCPR DYKYSDNNYA 840 RTNSATARGF WKTTGKERVI KAGGSIVRKR TFIFYEGRVP PYNKTNWVML EYCLIEDEAN 900 PTPKLAQQEQ RDFVLCCLKK KQDKKDTSIF AQPDEWPLIS EEYPQPEEPE

Sequence ? help Back to Top

Protein Sequence Length: 950 aa Download sequence

MALSRLRHPV ISRAPSLFRA RLLSSSTRSF TRTFSVQNST TLGDNTLSRP ATLSMLTGVQ  60
DKLSKLKPWT GVKYYSTADP LHVVLTMPAL SPTMSQGNIA KWKKKEGDKI EAGDILCEIE  120
TDKATVEFES LEEGFLAKIL IPEGSKDVPV GQPIAITVED ADDIQNLPAN VVGGSEVKED  180
IPPQQNVKKE DGVQDKSSVG INTSELPPHI LIEMPALSPT MSQGNIAKWK KKEGDKIEVG  240
DVICEIETDK ATVEFECLEE GYLAQILAPE GSKDIAVGQA IAVTVEDAAD LEIVKNAVFS  300
GSAVKEEKPI HQDTRDATRS EKTSVKRISP AAKLLITEHG LDTSSLKASG AHGTLLKGDV  360
LAAIKSGLGS TIVSSKEKTT PSAQVHPKTS APTSTESRSS KQTDSFEDFP NSQIRKVIAT  420
RLLESKQNIP HLYLSSDVIL DPLLSLRKDL KERHNVKVSV NDIVIKAVAV ALRNVPEANA  480
YWDAEKGEVF LCDSVDISIA VATEKGLMTP IVRNADQKTI SVISSEVKEL AEKARAGKLK  540
PNEFQGGTFS ISNLGMFPAS ILAVGRGNKV VEPVIGSDGI ERPAVVTKMN LTLSADHRVF  600
DGKVGGSFLS ALRSNFSEIR RLLFRPSQNR SSHGSNRHHS NVHNVQSPVA QIHHLQTIAP  660
HLTLEQCQQI LGTVGKEEVS QSQANFAAIP NPKLAQQRDF VLCRLRKNAD KNVTSICAVA  720
EPAYAELHGN SEECPQPEEL ELVFPALQLQ DNISEEMEFE IFRPAALYNY RFRPTEEELV  780
SHLRNKKLVD HIIPEIDICN HEPWDVPALY EGLFTEPDSP YQGMFFFCPR DYKYSDNNYA  840
RTNSATARGF WKTTGKERVI KAGGSIVRKR TFIFYEGRVP PYNKTNWVML EYCLIEDEAN  900
PTPKLAQQEQ RDFVLCCLKK KQDKKDTSIF AQPDEWPLIS EEYPQPEEPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	3e-30	NAC family protein