PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1067520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family BBR-BPC
Protein Properties Length: 278aa    MW: 30615.1 Da    PI: 10.2745
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1067520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind341.32.4e-10412781301
          GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdn 79 
                        mddd+ + rn+gyyep+  +k +lglqlmss+aerd+k     r+  + + ++++a+++rd          ++ +rd+++++        ++
  Pd.00g1067520.m01   1 MDDDALNMRNWGYYEPS--FKGHLGLQLMSSMAERDTKAfvpgRDPSV-MVSSNGAFHPRDcvvsdapvpLNY-MRDSWVNQ--------RD 80 
                        9***9999*******99..*******************99*9999999.99**********999999999999.99999999........78 PP

          GAGA_bind  80 kllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkks 171
                        k+l++++++ +        + vl++t+ ++slq      l+++     e+    ++p+      +ke  ++kkr  +  pk++k kk++k  
  Pd.00g1067520.m01  81 KFLNMMPANPN--------YAVLPETSGAHSLQI-----LQPPDSSRDERVARIEEPV-----ANKEGGTSKKRGGGGAPKTPKVKKPRK-- 152
                        9*****96654........899********9999.....5544444223332233333.....333444444455555555555555555.. PP

          GAGA_bind 172 ekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqg 263
                          +k++ +++s+ +r+k  kks+d+v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqg
  Pd.00g1067520.m01 153 --PKDN-NNPSV-PRVKPAKKSLDVVINGINMDISGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQG 240
                        ..2223.33443.689**************************************************************************** PP

          GAGA_bind 264 afkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                        afkk+LekLaaeGy+++np+DL+ hWA+HGtnkfvtir
  Pd.00g1067520.m01 241 AFKKVLEKLAAEGYNFANPIDLRGHWARHGTNKFVTIR 278
                        *************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDDDALNMRN WGYYEPSFKG HLGLQLMSSM AERDTKAFVP GRDPSVMVSS NGAFHPRDCV  60
VSDAPVPLNY MRDSWVNQRD KFLNMMPANP NYAVLPETSG AHSLQILQPP DSSRDERVAR  120
IEEPVANKEG GTSKKRGGGG APKTPKVKKP RKPKDNNNPS VPRVKPAKKS LDVVINGINM  180
DISGIPIPVC SCTGAPQQCY RWGCGGWQSA CCTTNVSMYP LPMSTKRRGA RIAGRKMSQG  240
AFKKVLEKLA AEGYNFANPI DLRGHWARHG TNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-110BBR-BPC family protein