PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1064790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 620aa    MW: 67602.9 Da    PI: 8.471
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1064790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS341.81.1e-1042496202374
               GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                        ++ L+e+A+a+s+g+ e+a ++L+rl +    +p+ ++ qRl  ++t AL++r++      ++  pp   +e  s+e++ +++l++++sP++
  Pd.00g1064790.m01 249 KQSLMEAATAISEGKSEAAAEILTRLTTSqvPNPRPNSEQRLLEVMTLALKSRVNP-----VDYPPP--VTELFSQEHAGSTQLLYDLSPCF 333
                        578**********************988744677779******************9.....332222..2223499**************** PP

               GRAS  92 kfshltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                        +f++++aN aIlea+ ++    ++vH+iDfdi+qG+Q++ LlqaL++Rp+g p +++iT+v++  +g +++l  ++++L+k+A++ gv +ef
  Pd.00g1064790.m01 334 RFGFMAANLAILEATLTDksatNKVHVIDFDIGQGGQYVLLLQALSARPNGLPaTVKITTVAD--NGGEDRLTMVRQNLSKVAKQHGVVLEF 423
                        **************9777678899*************************997769********..77************************* PP

               GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
                        n+ v+++l++l+ e+L ++p+E +aVn++++l++++desvs++++rde+L+ vk+lsP+vv++veqe+++n+++F++r+ e++ yy al++s
  Pd.00g1064790.m01 424 NI-VSQKLAELNRESLGCEPDEPIAVNFAFKLYSMPDESVSTDNPRDELLRRVKGLSPRVVTLVEQELNTNTAPFMARVKETCGYYGALLES 514
                        *9.8**************************************************************************************** PP

               GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk...sdgyrveeesgslv 359
                        ++++ + +++er+k E++ l+r++ n vaceg++r+er+e ++kWr+r+++aGF+  p+s+++++  k  l+  +   + g++v+ee+g ++
  Pd.00g1064790.m01 515 MKSTEAGDNSERVKAEEA-LSRKLINSVACEGRDRVERCEVFGKWRARMGMAGFELRPMSQNMTEVLKQRLSSGNnrvNSGFTVKEENGGVC 605
                        *9888999**********.*******************************************9999988886544235789*********** PP

               GRAS 360 lgWkdrpLvsvSaWr 374
                        +gW +r+L+++SaWr
  Pd.00g1064790.m01 606 FGWISRTLTVASAWR 620
                        **************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    
MQSGFTGGAG AGGVPDFYSG GRSISIATAM NNHHQHPSQP PYHRSSLPGL FLDNPSSQIA  60
RQTQSQSQSQ FQTQNPSTLI GKRTLAEFQA HQQQHHYHNP NQNFYLRSLK PRTFQHSSPI  120
SPLSPIDFSS SSTITGSDSS SSASSLLSHQ RFGLPLLQQL RPQPVHQTLP PAGSFVNNNP  180
VQNQTRVVSG VDSEKKMISN RLQDEWSETI QNLIGPGPGQ SQKPLSPSPT SSSSSSSSVA  240
SPASSTCSKQ SLMEAATAIS EGKSEAAAEI LTRLTTSQVP NPRPNSEQRL LEVMTLALKS  300
RVNPVDYPPP VTELFSQEHA GSTQLLYDLS PCFRFGFMAA NLAILEATLT DKSATNKVHV  360
IDFDIGQGGQ YVLLLQALSA RPNGLPATVK ITTVADNGGE DRLTMVRQNL SKVAKQHGVV  420
LEFNIVSQKL AELNRESLGC EPDEPIAVNF AFKLYSMPDE SVSTDNPRDE LLRRVKGLSP  480
RVVTLVEQEL NTNTAPFMAR VKETCGYYGA LLESMKSTEA GDNSERVKAE EALSRKLINS  540
VACEGRDRVE RCEVFGKWRA RMGMAGFELR PMSQNMTEVL KQRLSSGNNR VNSGFTVKEE  600
NGGVCFGWIS RTLTVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-154GRAS family protein