PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1059270.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Trihelix

Protein Properties

Length: 758aa MW: 85935.9 Da PI: 7.113

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1059270.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.1	1.1e-08	43	101	22	81
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 r+k ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++ + e++ +y Pd.00g1059270.m01 43 TRSKTRADKDREVAEFLQKHGVNRDAKTAGTKWDNMLGEFRKVYEWERGAEREQV-GKSY 101 56788889999*************************************9755444.3445 PP

Sequence ? help Back to Top
Protein Sequence Length: 758 aa Download sequence
MLWLARGWRI QYQGGPAGGS SDHGSGSSSR TEQIPTETGT PHTRSKTRAD KDREVAEFLQ 60 KHGVNRDAKT AGTKWDNMLG EFRKVYEWER GAEREQVGKS YFRLSPYERK LHRLPASFDE 120 EVFEELSQFM GSRMRTPQSR LGSAGDDSRS AFVVTRSLTQ PPSFKEDEFP PSGSKKQLMI 180 MSGGGEPFYH GGRGTLLGFH HHDQSSLDFT AGLSSSSASK ELRRIGKIRM TWEELVSLWA 240 EEGEHHRGRV RLQGSSFLNA DELTFFDDSM VACTMEAFED GPLRGFSVDR FVSGQQVKVF 300 GRRKPSSSTS GFNEKVQLSL PESSSRSIPS TEFQDPTEYY VGCLGAPPPS LPSLPELQWY 360 LQEPPPEELR FPLRKDVYRD LPQGKEIFFT TSTELLDCRA ITYDILSPII RTNPSLSAST 420 ATSRDSFIPI WDDCINRLVS KFCSLEMVFI RRPNASSPTE PLQDQWPNVT GFVRNFCLWR 480 GEETDQLRDS HDMNPSSSIV EKILWTYMDL PYIFGYYAIG YVVTFCALSR SQDRINRTDL 540 ATIDLSSPSE RLKALVPCYR IAGLLPLLAD RCFNNTNCNK LLPHSDFERL DLGNGRNIVE 600 MTPTTVTRFF SNVRKWTAVK EIYDFLDHRI PHAEFIHRSL EKDLGLVFKP RGCKCKPTNC 660 EQLVEALKYV TKSLVALHDL SFMHRDISWE KVMRRTEREN EWFVCGRAED AEGASKSVFG 720 SKPRAEADRS RLLPPPAAAA VFSAVSHSWW GSDVTLSL

Sequence ? help Back to Top

Protein Sequence Length: 758 aa Download sequence

MLWLARGWRI QYQGGPAGGS SDHGSGSSSR TEQIPTETGT PHTRSKTRAD KDREVAEFLQ  60
KHGVNRDAKT AGTKWDNMLG EFRKVYEWER GAEREQVGKS YFRLSPYERK LHRLPASFDE  120
EVFEELSQFM GSRMRTPQSR LGSAGDDSRS AFVVTRSLTQ PPSFKEDEFP PSGSKKQLMI  180
MSGGGEPFYH GGRGTLLGFH HHDQSSLDFT AGLSSSSASK ELRRIGKIRM TWEELVSLWA  240
EEGEHHRGRV RLQGSSFLNA DELTFFDDSM VACTMEAFED GPLRGFSVDR FVSGQQVKVF  300
GRRKPSSSTS GFNEKVQLSL PESSSRSIPS TEFQDPTEYY VGCLGAPPPS LPSLPELQWY  360
LQEPPPEELR FPLRKDVYRD LPQGKEIFFT TSTELLDCRA ITYDILSPII RTNPSLSAST  420
ATSRDSFIPI WDDCINRLVS KFCSLEMVFI RRPNASSPTE PLQDQWPNVT GFVRNFCLWR  480
GEETDQLRDS HDMNPSSSIV EKILWTYMDL PYIFGYYAIG YVVTFCALSR SQDRINRTDL  540
ATIDLSSPSE RLKALVPCYR IAGLLPLLAD RCFNNTNCNK LLPHSDFERL DLGNGRNIVE  600
MTPTTVTRFF SNVRKWTAVK EIYDFLDHRI PHAEFIHRSL EKDLGLVFKP RGCKCKPTNC  660
EQLVEALKYV TKSLVALHDL SFMHRDISWE KVMRRTEREN EWFVCGRAED AEGASKSVFG  720
SKPRAEADRS RLLPPPAAAA VFSAVSHSWW GSDVTLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-07	Trihelix family protein