PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1056110.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 245aa MW: 27460.7 Da PI: 6.2551 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 97.9 | 1.1e-30 | 76 | 170 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fYn+YAk++GFs+r+++ ++sk++++i++r+f+Cskeg+r+e++ k + k+rr ra tr gCka ++v++++ g+w+v+kle++HnH Pd.00g1056110.m01 76 NFYNAYAKQTGFSIRVNSYYRSKKDNSIISREFCCSKEGFRRERHAKkdsgeDAKRRRARALTREGCKALMTVRRRDCGRWYVAKLEKNHNH 167 6******************************************999989999899999********************************** PP FAR1 88 ela 90 el+ Pd.00g1056110.m01 168 ELV 170 *97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MEVVPSSECE AKGVDSFVAL GDEGYEHSVA EEVEAPVVLD DGKEGYVDFD LSQYIGGGVV 60 EPTLGMEFTS EDDARNFYNA YAKQTGFSIR VNSYYRSKKD NSIISREFCC SKEGFRRERH 120 AKKDSGEDAK RRRARALTRE GCKALMTVRR RDCGRWYVAK LEKNHNHELV TPAMRHFLRS 180 HKQDFAPEKS CSNSFSSPGL SLDAPVDVLT DCSSFGKMEF AMRPNPPSVG SSQLGLRQCL 240 DDNQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-31 | FAR1 family protein |