PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g104960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 180aa MW: 20907.8 Da PI: 5.857 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 78.5 | 1.5e-24 | 9 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP..wdLpkkvkaeekewyfFskrdkkyatgkrknratksgy..Wkatgkd 89 lp+G+rF+P++eel+ +yL +kv+ +l+ +++ e+d+y e ++L +++e+++yfF++ +kk+++g+r +r+ + g W+++ + Pd.00g104960.m01 9 LPVGCRFEPSEEELLAHYLYNKVNYLPLSS-NAVIECDLYGEEEiwRKLF--DETGETSLYFFTELKKKTRKGSRIERMSSGGCvtWRNQSN- 97 799************************999.778899**98864213443..34578899******************88877556*98876. PP NAM 90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+++++ +++ +g k+++ + +++++ k +Wvmhe+rl Pd.00g104960.m01 98 KAIYVNddepNKTIIGYKRMFSYVPKKTSTKAKGEWVMHEFRL 140 77777657777777**********99999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
METARSPGLP VGCRFEPSEE ELLAHYLYNK VNYLPLSSNA VIECDLYGEE EIWRKLFDET 60 GETSLYFFTE LKKKTRKGSR IERMSSGGCV TWRNQSNKAI YVNDDEPNKT IIGYKRMFSY 120 VPKKTSTKAK GEWVMHEFRL AGCLVNNNNE VSNSFQSCII IFGSFWFFEC DFLEFSLFSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 1e-17 | NAC family protein |