PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1048630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 603aa MW: 67069.2 Da PI: 6.369

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1048630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	61.8	1.3e-19	240	292	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k r +WtpeLH +F a++ L G k Pk+il+lm+v+ +t+ +v+SHLQkY+ Pd.00g1048630.m01 240 KHRAVWTPELHLKFTAALSAL-GDLKSRPKAILKLMNVPNITVRQVASHLQKYK 292 6899***************.9999*************************7 PP
2	Myb_DNA-binding	31.8	3.2e-10	244	292	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++ a lG ++k+I + m+ + t q+ s++qky+ Pd.00g1048630.m01 244 VWTPELHLKFTAALSALGDLksRPKAILKLMNvPNITVRQVASHLQKYK 292 7***************77**************************7 PP
3	Response_reg	58.6	3.4e-20	21	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 +l+vd + l ++ +++ le+ + +v++++ ++ al ++ e++ + l++ i+mp+md l +l+ ++++e +p+i+++++ + + a++al Pd.00g1048630.m01 21 ILLVDHDTLSLMCIASTLEQYSF-KVTTTEMASVALSMITEQKddYKLVMANINMPDMDSLSFLRVLHKKE--IPVIFMSSEMNVNVAKKAL 109 89*******************.***********666656*******************988..*************** PP HTTESEEEESS--HHHHHH CS Response_reg 91 kaGakdflsKpfdpeelvk 109 Ga fl+Kp++ e+l Pd.00g1048630.m01 110 AEGACFFLEKPISLEDLKS 128 *************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MEHMSRTETN GLPSFAHDLK ILLVDHDTLS LMCIASTLEQ YSFKVTTTEM ASVALSMITE 60 QKDDYKLVMA NINMPDMDSL SFLRVLHKKE IPVIFMSSEM NVNVAKKALA EGACFFLEKP 120 ISLEDLKSMW QHVYRKIRTP RKYKHKPNCG TKMNSGKDCQ GIKINEAGDV LRPPLGGVKR 180 NEAGGECSLA TGHALDIDKQ NTCTLTCKAQ GASGIKRPID DKEEQEEVNR DSNGTTGNKK 240 HRAVWTPELH LKFTAALSAL GDLKSRPKAI LKLMNVPNIT VRQVASHLQK YKNQVQRIRG 300 TDTTSLPSSL RRLSNCINGN EFPPAKQSSL VCQYDQRTSS FGVQGHTAQL DAPNSLITSP 360 IPVAGFNNHD YRRQNLYSGH TILSHYTNHH TNNPSEFYLR TQGQFQNLNQ IRETSSFGYG 420 AGMNEIMNQQ PLGIEENSFR TSESHFPSMN YITPEAAASP YISGNTFQVP KEPSVMNQEQ 480 YYTSSLTGPF DSQNQNQFST EGARLTTEVL ELVPEQIASG NATNPNKFPA DFNDGSQKLD 540 TTAGEASSPN ENQPLSEYDQ LLKLLEEDPQ EASCVGSVPN AGDADRYCEW LRETLLENST 600 DPL

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MEHMSRTETN GLPSFAHDLK ILLVDHDTLS LMCIASTLEQ YSFKVTTTEM ASVALSMITE  60
QKDDYKLVMA NINMPDMDSL SFLRVLHKKE IPVIFMSSEM NVNVAKKALA EGACFFLEKP  120
ISLEDLKSMW QHVYRKIRTP RKYKHKPNCG TKMNSGKDCQ GIKINEAGDV LRPPLGGVKR  180
NEAGGECSLA TGHALDIDKQ NTCTLTCKAQ GASGIKRPID DKEEQEEVNR DSNGTTGNKK  240
HRAVWTPELH LKFTAALSAL GDLKSRPKAI LKLMNVPNIT VRQVASHLQK YKNQVQRIRG  300
TDTTSLPSSL RRLSNCINGN EFPPAKQSSL VCQYDQRTSS FGVQGHTAQL DAPNSLITSP  360
IPVAGFNNHD YRRQNLYSGH TILSHYTNHH TNNPSEFYLR TQGQFQNLNQ IRETSSFGYG  420
AGMNEIMNQQ PLGIEENSFR TSESHFPSMN YITPEAAASP YISGNTFQVP KEPSVMNQEQ  480
YYTSSLTGPF DSQNQNQFST EGARLTTEVL ELVPEQIASG NATNPNKFPA DFNDGSQKLD  540
TTAGEASSPN ENQPLSEYDQ LLKLLEEDPQ EASCVGSVPN AGDADRYCEW LRETLLENST  600
DPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	2e-48	ARR-B family protein