PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1041610.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 244aa MW: 27707.6 Da PI: 10.1389 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 49.9 | 8.3e-16 | 32 | 123 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +W+++ + +L++a ++ +l+rg+l++++W+ev++++ + ++ +r+ +qCk++++ ++k+yk + ++ ++ + +s++p+f++l+a Pd.00g1041610.m01 32 CWSEDATSTLVDAWGRRYLELNRGCLRQKDWQEVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKFEMNRVSSSNGALTSSWPFFERLDA 123 7****************************************99999*********************9888888877777889******985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MGDLTDPQMT PSHATATTPS SNPRPMPVRE DCWSEDATST LVDAWGRRYL ELNRGCLRQK 60 DWQEVADAVN ALHGHTKKTH RTDVQCKNRI DTIKKKYKFE MNRVSSSNGA LTSSWPFFER 120 LDALIGSNYK KPSPSPPVAV PLPLGYRKTP SPATVVTAVA LPQKRSASSA ARLARAIERF 180 GEVYQRVEAE KLRQMVELEK QRMQFANDLE VQRMNMFMDT QVQLERIKHG KRSGSNDIYM 240 RGEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05550.2 | 1e-45 | Trihelix family protein |