PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1040810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 311aa    MW: 34713.6 Da    PI: 4.5293
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1040810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.63.4e-2591411128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                        +p Gf+FhP+d+el+ +yL +kv g++++ ++v++e+++y   ePwd+ +     k  ++ +++yfF+k +  + +g+r  r++ +g Wk  
  Pd.00g1040810.m01   9 VPIGFKFHPSDDELLRYYLLNKVCGTPFKYSNVVPEFNLYGRkEPWDIWNdfggqK-LEKGEDLYFFTKLKLVTGKGSRVARTIGNGSWKGE 99 
                        589***************************9*******996549****75345422.3356789**************************99 PP

                NAM  87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         + ++v +   k++  gl k + + +  +++ ++  W+mhey+l
  Pd.00g1040810.m01 100 DRGTKVSDPakKNTPLGLCKRFRYEN--DKSDQHGCWIMHEYSL 141
                        9999999886566679*****99984..4444699*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MAPCEYVDVP IGFKFHPSDD ELLRYYLLNK VCGTPFKYSN VVPEFNLYGR KEPWDIWNDF  60
GGQKLEKGED LYFFTKLKLV TGKGSRVART IGNGSWKGED RGTKVSDPAK KNTPLGLCKR  120
FRYENDKSDQ HGCWIMHEYS LHRSLVKPHS NSNTCGGDVL QSPTKILRQL ENSDEVVLGA  180
NFTPISEASE HNHWEEDRIQ PLAAQPLGGG SHPYPSIIQE AAVDEDSSNI NSGFGISSED  240
QTGGELGTEN VQLNVLGFPV HDNEMLDFLN RASFDDLVDM IQFDDNDDEL QAFAMSQSVM  300
GMESTTTAAT C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.17e-18NAC family protein