PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1032840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 668aa    MW: 75566.3 Da    PI: 5.9407
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1032840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS401.21.1e-1222946651374
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++lL++cA+av+++d +  ++lL+++++++sp gd+mqRla+yf+ +L+ar+a+ ++ +++ l ++++s    +++l+a++l+ +++P+ k
  Pd.00g1032840.m01 294 LRTLLTHCAQAVAANDERTGNELLKQIRQHSSPMGDAMQRLAHYFADGLEARMAGYGTPICRDLITKPAS---AADVLKAYNLYLDACPFKK 382
                        6789************************************************************999999...9****************** PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        +s l  N++I++ +e+++r+HiiDf+i +G+QWp+L++ L+sRp+gpp+lRiTg++ p++g   +e++eetg+rLa++Ae+ +vpfefn+ +
  Pd.00g1032840.m01 383 LSILFSNKTIMNVAEKATRLHIIDFGIHYGFQWPSLIRNLSSRPGGPPKLRITGIDLPQPGfrPAEMVEETGRRLANYAETNKVPFEFNA-I 473
                        ************************************************************9*9***************************.7 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        a++++++++e+L+++++E+l+Vn+v++l rllde+v +es+rd+vLkl+++++P+v++++  + +++++ Fl+rf eal ++s++fd+le++
  Pd.00g1032840.m01 474 AQTWDTIQIEDLKIDRDEVLVVNSVHRLRRLLDETVMVESPRDKVLKLIRKINPDVFTLAIVNGSYSAPFFLTRFREALFHFSTMFDMLETN 565
                        ******************************************************************************************** PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        +p+++ er+ +Ere++gr+++nv+aceg+er+er et+++W+ r  +aGF+++pl+++++k+ak  l+ ++ + + ++e+s++l+lgWk+r 
  Pd.00g1032840.m01 566 APHDAPERMLIEREIFGRQAMNVIACEGSERIERPETYKQWQVRNLRAGFTQLPLNQEIVKTAKDRLQSCYHKDFVIDEDSQWLLLGWKGRI 657
                        ***********************************************************************889****************** PP

               GRAS 367 LvsvSaWr 374
                         +++S+Wr
  Pd.00g1032840.m01 658 GYALSSWR 665
                        *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    
MYPDEDSPEE SDFSDVVLEY ISQMLMEEDM EEKTAMYQES AALHAAEQSY YELLQENFSS  60
PPCDLIHYAD HNHESHPLHC SYNSTICGSA RSIRDCDLPE YKSLHVASQS TSLPFHAPSN  120
ETGNVVDGFA DSLVSILRDP EFSNESELVM QFKRGFEEAS RFLPNANSLN VDFESNTLSL  180
KEGKAEAIGM VVKVDKKNEN SSDGSRGKKN PYHEDVSLER GKSNKLSAVY TESTVSSEMF  240
DRHLLNCGQG EYALRETLQN RTIKIVQQNG QSKGSSGGKD RGKRQGGKKD VVDLRTLLTH  300
CAQAVAANDE RTGNELLKQI RQHSSPMGDA MQRLAHYFAD GLEARMAGYG TPICRDLITK  360
PASAADVLKA YNLYLDACPF KKLSILFSNK TIMNVAEKAT RLHIIDFGIH YGFQWPSLIR  420
NLSSRPGGPP KLRITGIDLP QPGFRPAEMV EETGRRLANY AETNKVPFEF NAIAQTWDTI  480
QIEDLKIDRD EVLVVNSVHR LRRLLDETVM VESPRDKVLK LIRKINPDVF TLAIVNGSYS  540
APFFLTRFRE ALFHFSTMFD MLETNAPHDA PERMLIEREI FGRQAMNVIA CEGSERIERP  600
ETYKQWQVRN LRAGFTQLPL NQEIVKTAKD RLQSCYHKDF VIDEDSQWLL LGWKGRIGYA  660
LSSWRAAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein