PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1030800.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 473aa MW: 51886.7 Da PI: 7.1851 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.3 | 3.3e-17 | 140 | 189 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Pd.00g1030800.m01 140 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 189 78*******************......55************************998 PP | |||||||
2 | AP2 | 42.1 | 2.1e-13 | 232 | 282 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g Pd.00g1030800.m01 232 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIKCNG 282 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence |
MLDLNLSFVC NDVVSSSDNN LLHLPATTSP IQSSASFNSS SNLTAAGDDE DSSTLNFLSP 60 NDVAADDNAH CDARTIQLFP LAQSVLSSSS SSSSSRKHWL GLSSNSGLEV EPSYYAPAEQ 120 IVPLQQRVKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY 180 DRAAIKFRGT EADINFNVSD YEDDIKQMSN FTKEEFVHIL RRQSTGFSRG SSKYRGVTLH 240 KCGRWEARMG QFLGKKYIYL GLFDSEIEAA RAYDKAAIKC NGREAVTNFE PNSYDGQIMS 300 EAHNGGSDKS LDLNLGIAPP LVSELQKNSN LSSFPVQLGC DDIPIHMRTR NENSAPAPMR 360 AQLSHGSMVA SEEPPIMSNI NSSFFPIQVE RATEKRMDVN SFPNWAWQLQ GLNGGAPPMP 420 LFSAAASSGF PSSTATSPPA AVTQLHFPNT TILHHHCSPS TVTTNIPGFY CRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-101 | AP2 family protein |