PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1022720.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 254aa MW: 29437 Da PI: 5.6407

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1022720.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	75.8	1e-23	6	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgy 82 +p+G+rF+P++eel+ +yL ++v+g++ + v++++d+y + ePw++ + + + +++++y F++ +kk+++g+r r++ +g+ Pd.00g1022720.m01 6 VPVGYRFRPSEEELLLHYLLPRVNGNDYPK-GVVTDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTSLKKKTPNGSRFCRTVGaagTGV 94 599**********************999.99***98797423322..24355688**************643344999 PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 Wk + k++ + g+++g++k + + + +p+ +W+m e++l Pd.00g1022720.m01 95 WKGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137 *******9.999*******655555..89*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MAGYQVPVGY RFRPSEEELL LHYLLPRVNG NDYPKGVVTD CDLYGTKEPW EIWRDFHHSS 60 PDDQEDIYVF TSLKKKTPNG SRFCRTVGAA GTGVWKGEDS GKKIRACGND IGIRKRFRYM 120 NPGSPHDDRW IMLEFQLDES LVRVRNKETV VLCLFRKKET SGKSKLKERQ THEEDMPSRG 180 EIQAQHVHDD QQQHIDASTY DQLRVLEDFL MKDVKGEQDT MVNPTLLAQY GQQGTSTEDQ 240 LRFLEDYLMN DIEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	9e-21	NAC family protein