PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1021120.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 616aa MW: 71579.5 Da PI: 7.2928

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1021120.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	57.7	3.9e-18	22	72	2	53
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka 53 pGfrFhPtdeelv +yL++kve+k +++ e ik++diyk++PwdLpk+++ Pd.00g1021120.m01 22 LPGFRFHPTDEELVEFYLRRKVEKKAISI-ELIKSIDIYKHDPWDLPKAINI 72 59*************************.89*************74433 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MDSNYTSTKD DHQYIDEDDV QLPGFRFHPT DEELVEFYLR RKVEKKAISI ELIKSIDIYK 60 HDPWDLPKAI NIHRGSNTKN INSTDPQQEA EIWTLCRIFK RNVSYKKYTA DWRGLSGAKR 120 HPMDTVSSKK CTSDQDDLDQ SNNYISFGAS DNIICDEEKK PVVNHTNMNN FNGSNQQLHA 180 VGQLSSNMPA TYPYMETFSN FSYQDLENEL LNENWDELRS AAIHLAFDPT FPVHGVDQTV 240 NVDVKRKKKE RDGRRRSRGS GAPMLKHYWV AFFVVVSWVV NFRVLDASAG DADPLYRACV 300 KQCGETGCVA QRCFPQCNFS SDGVSVDGPW YMQEPLYMQW KQWDCQSDCR YYCMLDRENE 360 REATGHDPVK YHGKWPFKRV YGIQEPASVA FSVLNLAMHF HGWISFFILL YYKLPLRRDK 420 KTYYYFASLW HIYALLSFNS WFWSAVFHSR DVDLTEKLDY SSAVAILGYS LILSILRSFD 480 VKDDAVRVMV AAPLLAFVTT HILYLNFYKL DYGWNMQVCV VMAVVQLLLW AIWAGVTRHP 540 SRWKLWLVVL AGGLAMLLEI YDFPPYQGFV DAHAAWHATT IPLTYVWWSF IRDDAEFLTS 600 NQMKRLKTSN LAKKAK

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MDSNYTSTKD DHQYIDEDDV QLPGFRFHPT DEELVEFYLR RKVEKKAISI ELIKSIDIYK  60
HDPWDLPKAI NIHRGSNTKN INSTDPQQEA EIWTLCRIFK RNVSYKKYTA DWRGLSGAKR  120
HPMDTVSSKK CTSDQDDLDQ SNNYISFGAS DNIICDEEKK PVVNHTNMNN FNGSNQQLHA  180
VGQLSSNMPA TYPYMETFSN FSYQDLENEL LNENWDELRS AAIHLAFDPT FPVHGVDQTV  240
NVDVKRKKKE RDGRRRSRGS GAPMLKHYWV AFFVVVSWVV NFRVLDASAG DADPLYRACV  300
KQCGETGCVA QRCFPQCNFS SDGVSVDGPW YMQEPLYMQW KQWDCQSDCR YYCMLDRENE  360
REATGHDPVK YHGKWPFKRV YGIQEPASVA FSVLNLAMHF HGWISFFILL YYKLPLRRDK  420
KTYYYFASLW HIYALLSFNS WFWSAVFHSR DVDLTEKLDY SSAVAILGYS LILSILRSFD  480
VKDDAVRVMV AAPLLAFVTT HILYLNFYKL DYGWNMQVCV VMAVVQLLLW AIWAGVTRHP  540
SRWKLWLVVL AGGLAMLLEI YDFPPYQGFV DAHAAWHATT IPLTYVWWSF IRDDAEFLTS  600
NQMKRLKTSN LAKKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	2e-21	NAC family protein