PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g101860.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 698aa    MW: 79105 Da    PI: 6.3047
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g101860.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS388.19.9e-1193256962374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av+s d++ a++lL+++++++sp+gd++qRla+yf+ +L+arla+  +  y+ l + + s    +e+l+a+++f+  sP+  +s
  Pd.00g101860.m01 325 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDANQRLAHYFADGLEARLAGARTPSYSFLVSMQIS---AAEVLKAYEVFVTSSPFKMVS 414
                       579***************************************************999999999999998...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       h++aN++Il+ +++++r+H+iDf+is+G+QWp+++q L++R +gpp+lRiT+++ p++g   +e++eetg+rL+k+Ae+++vpfe+nv +a++
  Pd.00g101860.m01 415 HFLANRTILKLADKATRLHVIDFGISYGFQWPCFIQHLSKRLGGPPKLRITAIELPQPGfrPTERVEETGRRLKKYAERFNVPFEYNV-IAQK 506
                       **********************************************************9****************************9.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+L+++++E+++Vn++ +l++++de+v ++s+rd vLkl+k+++P+++++   +  +ns+ F++rf eal ++salfd +ea++pre
  Pd.00g101860.m01 507 WETIQFEDLKIDRNEVIVVNCMNRLKHIPDETVMVNSPRDIVLKLIKKINPDLFIHGVVNGTYNSPFFVTRFREALFHFSALFDVFEASVPRE 599
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                       +e r ++E+ + g++i nvvaceg er+er et+++W+ r  +aGFk++p++++  k+++ +l+ ++  + +r++e+ +++++gWk+r+++++
  Pd.00g101860.m01 600 DERRLMYEKYVYGKDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPVDQELLKKMRKMLKFMGyHNDFRIDEDGHWILQGWKGRTILAL 692
                       ****************************************************************9999999********************** PP

              GRAS 371 SaWr 374
                       S+W+
  Pd.00g101860.m01 693 SFWK 696
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 698 aa     Download sequence    
MERFNFGRGS ASFYSNQNLV NGFQVNQEST SPVCLSTNLD HPSDSNTSLT SGSDGDTIDI  60
SEYNRPVIKY ISDILLEEDL EGKPCMLQDC LALQAAEKSF YDVLNQKDPP SPNQPPLSVH  120
QSFENSDDDS PHSCHSSNGS IAAKTDWVFD PSEASHVQSS LVQSLSDAGL VSDSLSEMQS  180
LGHFGGLGEA SKFLPNIKLE GYRLMPPGLD QWPSSTNILM TTPDNDGYNS TNGSKGKKNH  240
QREDADYPEE GRSNKQPVAF ADDSEPQEMF DEVLLCHGNH EFESCSPDES LITEGSGKLQ  300
RNKQKGSKTA RSKKQNNNWE LVDLSTLLTQ CAQAVASYDQ RTASELLKQI RQHSSPYGDA  360
NQRLAHYFAD GLEARLAGAR TPSYSFLVSM QISAAEVLKA YEVFVTSSPF KMVSHFLANR  420
TILKLADKAT RLHVIDFGIS YGFQWPCFIQ HLSKRLGGPP KLRITAIELP QPGFRPTERV  480
EETGRRLKKY AERFNVPFEY NVIAQKWETI QFEDLKIDRN EVIVVNCMNR LKHIPDETVM  540
VNSPRDIVLK LIKKINPDLF IHGVVNGTYN SPFFVTRFRE ALFHFSALFD VFEASVPRED  600
ERRLMYEKYV YGKDILNVVA CEGLERVERP ETYKQWQVRN VRAGFKQLPV DQELLKKMRK  660
MLKFMGYHND FRIDEDGHWI LQGWKGRTIL ALSFWKKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-179GRAS family protein