PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g101850.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 715aa    MW: 81466.8 Da    PI: 6.0426
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g101850.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS393.32.6e-1203427132374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av+s d++ a++lL+++++++sp+gd++qRla+yf+ +L+arla+  +  y+ l + + s    +e l+a+++f+  sP+ ++s
  Pd.00g101850.m01 342 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDATQRLAHYFADGLEARLAGARTPSYSPLISMQIS---AAEILKAYEVFVTSSPFRTVS 431
                       579***************************************************989999888888887...8******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +++aN++Il+ +e+e+r+H+iDf+is+G+QWp+++q L++Rp+gpp+lRiT+++ p++g   +e++eetg+rL+k+Ae+++vpfe+nv +a++
  Pd.00g101850.m01 432 NFLANRTILKLAEKETRLHVIDFGISYGFQWPCFIQRLSKRPGGPPKLRITAIEVPQPGfrPTERVEETGRRLKKYAERFNVPFEYNV-IAQK 523
                       **********************************************************9****************************9.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+L+++++E+++Vn++ +l +++de+v ++s+rd vLkl+k+++P+++++   +  +ns+ F++rf eal ++salfd +ea++pre
  Pd.00g101850.m01 524 WETIQFEDLKIDRNEVIVVNCMNRLRHIPDETVMVNSPRDIVLKLIKEINPDLFIHGVVNGTYNSPFFVTRFREALFHFSALFDVFEASVPRE 616
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                       +e r + E+++ g++i nvvaceg er+er et+++W+ r  +aGFk++pl++++ k++k++l+ ++  + +r++ee +++++gWk+r+++++
  Pd.00g101850.m01 617 DERRLMFEKAVYGKDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPLDQEILKKVKRMLKFMGyHNDFRIDEEGHWILQGWKGRTIMAL 709
                       ****************************************************************9999999********************** PP

              GRAS 371 SaWr 374
                       S+W+
  Pd.00g101850.m01 710 SFWK 713
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MDTLPERYSL SLERFNFGHG SASFYSNQNL VNGFQVNQES TGPICLSTTL DHPSDSNTFL  60
SSGSDGDTTD IRDYNCPVIK YISDILLEED LEGKPCMLQD CLALQAAEKS FYDVLNQKDP  120
LSPKQPPLLV HQSFENSDDD SPRSCHSSNT SIAAKTNWVF DPSETSHVQS SLVQSLPDAA  180
LDSDSLSEMQ RLEYFGGLRE ASKFLPNVKF ETIDLKGCQL MPPGLDQWPP AANTLMRRPD  240
NDDYSSTNRS KGKKNHQRDD GDYPEEGRSN KQPVAFADDS EPQEMFDEVL LCLGNFEFES  300
CSNDESLITE GSRKLQHNKQ SKGSKTAGSK KQNNNRELVD LSTLLTQCAQ AVASYDQRTA  360
SELLKQIRQH SSPYGDATQR LAHYFADGLE ARLAGARTPS YSPLISMQIS AAEILKAYEV  420
FVTSSPFRTV SNFLANRTIL KLAEKETRLH VIDFGISYGF QWPCFIQRLS KRPGGPPKLR  480
ITAIEVPQPG FRPTERVEET GRRLKKYAER FNVPFEYNVI AQKWETIQFE DLKIDRNEVI  540
VVNCMNRLRH IPDETVMVNS PRDIVLKLIK EINPDLFIHG VVNGTYNSPF FVTRFREALF  600
HFSALFDVFE ASVPREDERR LMFEKAVYGK DILNVVACEG LERVERPETY KQWQVRNVRA  660
GFKQLPLDQE ILKKVKRMLK FMGYHNDFRI DEEGHWILQG WKGRTIMALS FWKKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein