PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g101840.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 1405aa    MW: 158882 Da    PI: 6.4331
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g101840.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS358.69.5e-1103216722354
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL+ecA+av s d++ a++lL+++++++sp+g ++qR+a+yf+e+L+arla+  s  y+ l   +ts   ++e l+a+++++ ++P+ k+ 
  Pd.00g101840.m02 321 CKLLTECAQAVGSYDQQYASELLKQIRQHSSPYGYATQRVAHYFAEGLEARLAGARSLSYAPLLIMHTS---TTEILKAYQVYVSACPFKKML 410
                       589***************************************************888888888888887...89******************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       h+ aN++I++ +e+++r+HiiDf+is+GlQWp+L+q+L+++++gpp+lRiT+++ p++g   +e++eetg+rLak+ ++ gvpfe+nv +ak+
  Pd.00g101840.m02 411 HFFANRTIMKQTEKATRLHIIDFGISYGLQWPCLIQSLSEKTGGPPNLRITAIEFPQPGfrPAERIEETGRRLAKYSKRYGVPFEYNV-IAKK 502
                       **********************************************************9****************************9.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e+++leeL+++++E+++Vn++++l++++de+v ++++rd+vL+l+k+++P+++ +   +  +n++ F++rf + l ++ alfd++ea++pr+
  Pd.00g101840.m02 503 WETIRLEELQIDRNEVIVVNCMHRLKQIPDETVMMNNPRDAVLNLIKRINPDLFMHGVVNGTYNAPAFVTRFKQLLFHFHALFDMYEATVPRD 595
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee 354
                       +e+r   Er+++gr+i+nv+aceg er+er et+++W++r  +aGFk++pl+ + +k++k++ ++++  + + +e++
  Pd.00g101840.m02 596 DEHRLLFERAIFGRDIMNVIACEGLERVERPETYKQWQARYVRAGFKQLPLDRELVKKVKTMSKMMGyHKDFGIEDD 672
                       *****************************************************************998888999876 PP
2GRAS290.64.2e-89101513223324
              GRAS    3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93  
                        +lL++cA+av+s d++ a++lL+++++++sp+gd+++Rla+yf+ +L+arla++ +  y+ l + +t+    +e l+a++l++  +P+ k+
  Pd.00g101840.m02 1015 TLLTQCAQAVASYDQRTASELLKQIRKHSSPYGDATERLAHYFADGLEARLAGTRTPSYSPLLSIQTP---AAEILKAYQLYVTHCPYKKM 1102
                        69***************************************************999999999888888...8******************* PP

              GRAS   94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182 
                         h+  N++I++ +e+++r+HiiDf+is+G+QWp+++q L++Rp+gpp++R+ +++ p++g   +e++eetg+rL k+A++++vpf+++v +
  Pd.00g101840.m02 1103 LHFFSNRTIMKLAEKATRLHIIDFGISYGFQWPCFIQRLSKRPGGPPNIRMIAIELPQPGfrPTERVEETGRRLDKYAKRFNVPFQYKV-I 1192
                        ***********************************************************9****************************9.7 PP

              GRAS  183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273 
                        a+++e++++e+L+++++E ++Vn++++l++++de+v  +s+rd+vLkl+k+++P++ ++   +  +ns+ Fl+rf eal ++sa fd++ea
  Pd.00g101840.m02 1193 AQKWETIQFEDLKIDRDELIVVNCMHRLKHIPDETVMASSPRDTVLKLIKRINPDLYIHGVINGAYNSPFFLTRFREALFHFSAQFDMFEA 1283
                        ******************************************************************************************* PP

              GRAS  274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerlee.aGF 324 
                        ++pre+e+r + E++             g er+er et+++W+ r ++  GF
  Pd.00g101840.m02 1284 TIPREDEQRLMFEKA-------------GLERVERPETYKQWQVRYQRaIGF 1322
                        **************9.............999999********9999873466 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1405 aa     Download sequence    
MEELNFGHGS NSVSSDQNLV SGLQVNHEPT NKLLLPANLD RPSDSGTSSE GDTVDSSDCN  60
LPVLKYISDI LLEEDLEGKP CMLEDILGLQ AAEKSFYDAL NQKDPPLPNQ PSFSVYQSFE  120
NSDGGFQSSN GSISGFQSSN GSIAAKTGSV WDFSETSHVQ TSLVELLSDT TLVSDSFSDT  180
QSLGNFRGVG EGNEIIDLEG YHCTPPGPNT LYRNLASVPE NYGYHSTNGS KGKKNHQREE  240
GHYTEEGRSN KQSAAFADDS DLQEMFDKVL QGVNPESESC FHDESLNAEG TRKLQHNKQS  300
KGSKTTCSKK PNSNRQVVDL CKLLTECAQA VGSYDQQYAS ELLKQIRQHS SPYGYATQRV  360
AHYFAEGLEA RLAGARSLSY APLLIMHTST TEILKAYQVY VSACPFKKML HFFANRTIMK  420
QTEKATRLHI IDFGISYGLQ WPCLIQSLSE KTGGPPNLRI TAIEFPQPGF RPAERIEETG  480
RRLAKYSKRY GVPFEYNVIA KKWETIRLEE LQIDRNEVIV VNCMHRLKQI PDETVMMNNP  540
RDAVLNLIKR INPDLFMHGV VNGTYNAPAF VTRFKQLLFH FHALFDMYEA TVPRDDEHRL  600
LFERAIFGRD IMNVIACEGL ERVERPETYK QWQARYVRAG FKQLPLDREL VKKVKTMSKM  660
MGYHKDFGIE DDVSAKVVVI VDTLLERLSV TKEKFHFGHG SIPVHSNQNL VNGFQVNHEP  720
TNPPFLPTNS DHPSDSSTSL SSGSDGDAFD ISDCSQPVLK YISDILLEED LEGKPCMLQD  780
CLALQAAEKS FYDVLNQKDP PSPNQPPLSD HQSFENSDDD STHSCHRSND YRAEKTDWVF  840
YSSETSHVQS SLVESPPDTL LASDSLYGNF GGVGEARKLL PNENFGIIDL EKYQFMSQGP  900
NTLFRNLASK TENDGYNSTN ISKEKKSRQR EDGDYAEEGR SNKQSAAYAD DSEPQEMFDK  960
VLLCSVNHES ESCSHDIPLK NEGSGKLKSN KQSKGSKTAR SKKQNNKREV VDFSTLLTQC  1020
AQAVASYDQR TASELLKQIR KHSSPYGDAT ERLAHYFADG LEARLAGTRT PSYSPLLSIQ  1080
TPAAEILKAY QLYVTHCPYK KMLHFFSNRT IMKLAEKATR LHIIDFGISY GFQWPCFIQR  1140
LSKRPGGPPN IRMIAIELPQ PGFRPTERVE ETGRRLDKYA KRFNVPFQYK VIAQKWETIQ  1200
FEDLKIDRDE LIVVNCMHRL KHIPDETVMA SSPRDTVLKL IKRINPDLYI HGVINGAYNS  1260
PFFLTRFREA LFHFSAQFDM FEATIPREDE QRLMFEKAGL ERVERPETYK QWQVRYQRAI  1320
GFCRDGKEEP LWLFPFGKKP RPLLKSLVSL LLNFSFNLPC IYEVVFTVLS CCNEFIVNFI  1380
YSSLPMGALS GICNIFLSKL EQSTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-164GRAS family protein