PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g101790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 691aa    MW: 78179.3 Da    PI: 4.9969
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g101790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS359.93.7e-1103276893374
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       +lL++cA+av+s d + a++ L ++++++sp+gd +qRla+y++++L+ rla         l+p    e++ ++ l a++++  ++P+ k+s+
  Pd.00g101790.m01 327 TLLTQCAQAVASYDIRTANEQLRQIRQHSSPYGDGTQRLAHYLANGLELRLAA-----GVPLNP----EMSAADLLRAYQTYITACPFQKMSN 410
                       69**************************************************9.....222333....34579******************** PP

              GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                       + aN++I + +e+++r+HiiDf++ +G QWp+L+q L++R +gpp+lRiTgv+ p++g   +e++e+tg+rLa+++e+++vpfe+nv +ak++
  Pd.00g101790.m01 411 FYANRTIAKLAEKATRLHIIDFGVLYGYQWPCLIQGLSNRHGGPPTLRITGVEFPQPGfrPSERVEATGRRLANYCERFKVPFEYNV-IAKNW 502
                       *********************************************************9****************************9.7**** PP

              GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                       e++++e+++++++E ++Vn+ ++l++l+de+v+ +  rd+vLkl+++++P+++++   + ++n++ F +rf eal ++s+lfd++e++lpre+
  Pd.00g101790.m01 503 ETIQYEDIKIDRDELIVVNCLYRLKNLPDETVTDSP-RDTVLKLIRRINPDIFIHGVVNGSYNAPFFDTRFREALFHFSSLFDMFEETLPRED 594
                       ****************************99888777.******************************************************** PP

              GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSa 372
                       ++r   E+e+ gr++ nv+aceg++r+er et+++W+ r ++aGF+++pl++++ k++++++   + + + v+e+  ++++gWk+r + ++S 
  Pd.00g101790.m01 595 QQRLLFEKEVYGRDVINVIACEGSRRFERPETYKQWQFRNKRAGFRQLPLDQEILKKVRSMVTSEYHKDFVVDEDGMWVLQGWKGRIIHAISY 687
                       **************************************************************9999888************************ PP

              GRAS 373 Wr 374
                       W+
  Pd.00g101790.m01 688 WK 689
                       *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    
MDTFLDEIPS SMNKFIFDQG SVPAYSNQNI GTEFEADHDF TDPSFFLVNP DPSSDFSSLS  60
GFSSEVDSPD SQSSNAILKY ISEMLMEEEL ENKPCMLQDC LALQAAEKSL HDVLVQDYPS  120
SANSLLTSVY QNVENPDEGS NHSSNGSVAA SNCVGSDWDC VQDVFQSSRI QISATESPAY  180
TLSVPNPLLS NGQGEIIAVE SSSSFPIEPR ELAKDVSFNS VQDGSSSPRG SRSKKNRQRE  240
DGDDLDEGRS NKQSAVYADE SELPELFDKV LLCQGEKQES QSCSPQESEH KEGSGKLQLN  300
RKSRGSKGKK TRKKKPDDNT GGVDLWTLLT QCAQAVASYD IRTANEQLRQ IRQHSSPYGD  360
GTQRLAHYLA NGLELRLAAG VPLNPEMSAA DLLRAYQTYI TACPFQKMSN FYANRTIAKL  420
AEKATRLHII DFGVLYGYQW PCLIQGLSNR HGGPPTLRIT GVEFPQPGFR PSERVEATGR  480
RLANYCERFK VPFEYNVIAK NWETIQYEDI KIDRDELIVV NCLYRLKNLP DETVTDSPRD  540
TVLKLIRRIN PDIFIHGVVN GSYNAPFFDT RFREALFHFS SLFDMFEETL PREDQQRLLF  600
EKEVYGRDVI NVIACEGSRR FERPETYKQW QFRNKRAGFR QLPLDQEILK KVRSMVTSEY  660
HKDFVVDEDG MWVLQGWKGR IIHAISYWKP V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1301316RKSRGSKGKKTRKKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-177GRAS family protein