PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1017170.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 740aa MW: 80885.3 Da PI: 6.2376

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1017170.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.5	3.6e-15	472	508	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +k+CnCk+skClk+YC+Cfaag +C e C+C++C+Nk Pd.00g1017170.m01 472 CKRCNCKRSKCLKLYCDCFAAGLYCIEPCSCQECFNK 508 79**********************************8 PP
2	TCR	51.7	1.8e-16	556	595	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnC+ks ClkkYCeCf+ g+ Cs C+C +CkN+ Pd.00g1017170.m01 556 RHKRGCNCRKSGCLKKYCECFQGGAGCSILCRCIGCKNTF 595 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MDTPLKNQTT TPTTPLPSKY EDSPVFNYIS NLSPIEPVKS RGNDHTFNSL TFASLPSIFT 60 SPQNVSLGET RFSLKRHHSE ASNPESFQTP NPSDKLKGVP VAVEQSYFGT KQSECFTPGS 120 SGTEVTNAIP AENLELAIEL SNTLKYSSGS PDRNVPCDAT GTVLETAATP ASLVQSVVHH 180 SEERHSSFER ETHLRRIFGM QREKEAAGVD WTRLISDASD LLNFDSTTIE ESSDGEDPKT 240 VDPGAICFIS NILQDNHDDM EVMESGPIDS SEQYESGKFS NQSEGIGDLK ETDEAPAVLS 300 RNLLDKLNVD DKCPNCIHSS CKHSSQSYAI SRRCLDFERA ETHKRKSICD TSGSYSVPLQ 360 SNCEVTLVEK KLIRTTAGCD YSSSRLPGIG LHLNALATTS ESNLSKVVNH ETQASESQVT 420 ETSNSKISST CLTPSEVSRD ESCKSEVHIA ETPPEACAPV GVESDHRESL ACKRCNCKRS 480 KCLKLYCDCF AAGLYCIEPC SCQECFNKPI YENIVVETRR LIESRNPLAF APKVIGSINA 540 TPQFGEETNS TPTSVRHKRG CNCRKSGCLK KYCECFQGGA GCSILCRCIG CKNTFGRKDE 600 AEESEIEEHK SRVRKKDATD VSLGRVKDQD LPMTLPGICR PSGQLTASFS GKPKIFSLHS 660 VLSSPQPERH LQVIPEEETL EALDNSCSQP SGVKSTSPNS KRVSPPHGSS EFGSAAWRGG 720 RKLVLRSIPP FPTLASPRKH

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MDTPLKNQTT TPTTPLPSKY EDSPVFNYIS NLSPIEPVKS RGNDHTFNSL TFASLPSIFT  60
SPQNVSLGET RFSLKRHHSE ASNPESFQTP NPSDKLKGVP VAVEQSYFGT KQSECFTPGS  120
SGTEVTNAIP AENLELAIEL SNTLKYSSGS PDRNVPCDAT GTVLETAATP ASLVQSVVHH  180
SEERHSSFER ETHLRRIFGM QREKEAAGVD WTRLISDASD LLNFDSTTIE ESSDGEDPKT  240
VDPGAICFIS NILQDNHDDM EVMESGPIDS SEQYESGKFS NQSEGIGDLK ETDEAPAVLS  300
RNLLDKLNVD DKCPNCIHSS CKHSSQSYAI SRRCLDFERA ETHKRKSICD TSGSYSVPLQ  360
SNCEVTLVEK KLIRTTAGCD YSSSRLPGIG LHLNALATTS ESNLSKVVNH ETQASESQVT  420
ETSNSKISST CLTPSEVSRD ESCKSEVHIA ETPPEACAPV GVESDHRESL ACKRCNCKRS  480
KCLKLYCDCF AAGLYCIEPC SCQECFNKPI YENIVVETRR LIESRNPLAF APKVIGSINA  540
TPQFGEETNS TPTSVRHKRG CNCRKSGCLK KYCECFQGGA GCSILCRCIG CKNTFGRKDE  600
AEESEIEEHK SRVRKKDATD VSLGRVKDQD LPMTLPGICR PSGQLTASFS GKPKIFSLHS  660
VLSSPQPERH LQVIPEEETL EALDNSCSQP SGVKSTSPNS KRVSPPHGSS EFGSAAWRGG  720
RKLVLRSIPP FPTLASPRKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-82	CPP family protein