PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1016990.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 432aa MW: 47082.8 Da PI: 4.4804

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1016990.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	115.9	2.4e-36	134	233	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkif 89 lfqrlw++eDei lLqG++d+++ +g + ++d+ fy+++k++++++++k+qlveK+rrLKkK+++ +k++sgke+sf+++hdq +f Pd.00g1016990.m01 134 LFQRLWTDEDEIELLQGFLDYTTMRGNkgshHGQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKIASGKEVSFKSPHDQATF 225 79******************9999865433345***************************************************** PP DUF573 90 elskkiWg 97 e+s+kiW Pd.00g1016990.m01 226 EISRKIWS 233 *****6 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MAPDQDDAVL PEGDLSSSSQ DDEEEDDVVD DDEEEDDVDD DDDVLNDDVI NSASPSTSSA 60 GATDSLPVAI ATPTVTVALP ARDPPPLALA TTTSTATTVI ANDAVLSSDP KRHAVLSPQP 120 EEKKPAALDD SRRLFQRLWT DEDEIELLQG FLDYTTMRGN KGSHHGQNDT ALFYDQIKSK 180 LQLDFNKNQL VEKLRRLKKK YRNVLNKIAS GKEVSFKSPH DQATFEISRK IWSNIGRIGP 240 DDNALDDEDP SPNPNNPNFN NYEIKNEEAA GFAGDKKSTP RSRKRSRTQL RAEEKPPPSR 300 GGFVEPSPVI KDNNNSINNS NHGGGGGNSC SNCNVHGLIE ETVKSCLSPL FKELLSNAMG 360 GGSARGFGGL SLNPIPLSFG GPSMNLNFGG GEGADEKWRK QQILELEVYS KRLELVQNQI 420 KVALEELRSS RG

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MAPDQDDAVL PEGDLSSSSQ DDEEEDDVVD DDEEEDDVDD DDDVLNDDVI NSASPSTSSA  60
GATDSLPVAI ATPTVTVALP ARDPPPLALA TTTSTATTVI ANDAVLSSDP KRHAVLSPQP  120
EEKKPAALDD SRRLFQRLWT DEDEIELLQG FLDYTTMRGN KGSHHGQNDT ALFYDQIKSK  180
LQLDFNKNQL VEKLRRLKKK YRNVLNKIAS GKEVSFKSPH DQATFEISRK IWSNIGRIGP  240
DDNALDDEDP SPNPNNPNFN NYEIKNEEAA GFAGDKKSTP RSRKRSRTQL RAEEKPPPSR  300
GGFVEPSPVI KDNNNSINNS NHGGGGGNSC SNCNVHGLIE ETVKSCLSPL FKELLSNAMG  360
GGSARGFGGL SLNPIPLSFG GPSMNLNFGG GEGADEKWRK QQILELEVYS KRLELVQNQI  420
KVALEELRSS RG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-74	GeBP family protein