PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1016980.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GeBP | ||||||||
Protein Properties | Length: 261aa MW: 30149.3 Da PI: 8.8742 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 89.2 | 5e-28 | 14 | 114 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk....aksgkepsfskehdqki 88 +r+ws+eDe+ lL+ l+d ++g+ ++d+ fye vk +++++ ++ q+veK+rrLKkK+++ v+k ++gke++f+++hd+ + Pd.00g1016980.m01 14 RKRVWSKEDELELLRSLLDDYYSRGQirTTVKDTASFYEEVKPKLKLECNRVQMVEKLRRLKKKYHNVVNKmndmNSTGKEFRFKNPHDKVV 105 58*****************9999999877888************************************9998887789************** PP DUF573 89 felskkiWg 97 fels kiW+ Pd.00g1016980.m01 106 FELSDKIWN 114 ********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MMFEAPEENK KRRRKRVWSK EDELELLRSL LDDYYSRGQI RTTVKDTASF YEEVKPKLKL 60 ECNRVQMVEK LRRLKKKYHN VVNKMNDMNS TGKEFRFKNP HDKVVFELSD KIWNVVDSHE 120 DYAPNSKYVS ICNNIKVKKE EDNVGSSSVA DHEQPQMRHA WSHSRLTTTS CGYKYDEAVG 180 DPSYPIPPGL QFDKLPEDWR CPTCGAAQSF FVSKSVEIAG FAQNQQFGLG GNTLTSGQKA 240 VLIFGGLFLF FVLFLSGYFL Q |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 9 | 16 | NKKRRRKR |
2 | 10 | 15 | KKRRRK |
3 | 10 | 16 | KKRRRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 5e-21 | GeBP family protein |