PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1013510.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 232aa MW: 26342.8 Da PI: 9.4685 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.8 | 2.5e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l+++++++G g+W+++++ g+ R++k+c++rw +yl Pd.00g1013510.m01 14 KGLWSPEEDDKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.3 | 9.7e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ Pd.00g1013510.m01 67 RGPFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89********************.*********.*********9986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 232 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDDKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGPF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPNTHKPLS EVLDQDDKEI SKLSPTYRSN EKASVGSNEL NLAEAVNSKP PAVSENRYPL 180 EVKPETSQFL SNSSSATTTT STWHHQNQQA FQASEMCTKD LQRLAVAFGQ TL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G57560.1 | 5e-90 | MYB family protein |