PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1008460.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 750aa    MW: 84229.7 Da    PI: 6.8462
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1008460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS378.86.8e-1163777481374
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++lL++cA+av+++d++ a++lL+++++++sp gd +qRla++++ +L+arla+++s++ykal +++ts    ++ l+a++l+  +sP+ k
  Pd.00g1008460.m01 377 LRTLLINCAQAVAADDHRSANELLKKVRQHSSPFGDGTQRLAHCLADGLEARLAGTGSQIYKALVSKRTS---AADFLKAHHLYLAASPFKK 465
                        6789*************************************************************99999...9****************** PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        +s+++ N++I++ +++++rvH+iDf+i +G+QWp+L+q ++ R++gpp+lRiTg++ p++g   +e++eetg+rLa +Ae+++vpfe+n+ +
  Pd.00g1008460.m01 466 ISNFVSNKTIMNLAQNATRVHVIDFGILYGFQWPTLIQRISWRDGGPPRLRITGIEFPQPGfrPAERVEETGHRLAAYAEKFNVPFEYNA-I 556
                        ************************************************************9*****************************.7 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        ak++++++leeL+++++E+l+Vn+ ++ ++lldesv+++s+r++vL+l+++++P+++++   +   n++ F++rf eal ++s+lfd+le+ 
  Pd.00g1008460.m01 557 AKNWDTIKLEELKIDRDEVLVVNFLYRGKNLLDESVAVDSPRNRVLDLIRRINPDLFIHGIVNGAFNAPFFVTRFREALFHFSSLFDMLETV 648
                        ******************************************************************************************** PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        +pre++er+ +E e++gre+ nv+aceg er+er et+++W+ r  +aGF ++pl+   +k a   +r  + + + ++e+s +l++gWk+r+
  Pd.00g1008460.m01 649 VPREDRERMLIETEIFGREALNVIACEGWERVERPETYKQWQVRNLRAGFVQLPLDRGLVKRAGEKVRSGYHKDFVIDEDSRWLLQGWKGRT 740
                        *********************************************************************99888****************** PP

               GRAS 367 LvsvSaWr 374
                        ++++S W+
  Pd.00g1008460.m01 741 VYALSTWK 748
                        *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    
MTMDRRLRAF SDSFNGVQLG NRVLPVLSHP NIVARSQLDS NTFLDNNYRE FNNPQPVLTP  60
NNVSSYASVS PEDDSQEDCD FSDVVLKYIN QMLMEEDMED KTCMLQESLE LQAAEKSFYE  120
VLGKKYPPSP ELHQDYAFQY GESPGDSFSG TGSNYITSTC NSGGYFSDNT LIQSPDGYLS  180
QLKGLPAYSI SQSRYGSSTR VSSLDGQVDS PNSLHKPDLN TKSQSVWQFK KGVEEASRFL  240
PGETKLVVNL EANGLSAQAP KVGTNGEVVK VEKKDEGEYS PSGSRGRKNL YREDDDVEES  300
RSSKQAAVST ESTLRSELFD TVLLCSTGEG LERLESLREA LQNGMSKSMP QNGQSKGSNG  360
GKGRGKKQTG KKEVVDLRTL LINCAQAVAA DDHRSANELL KKVRQHSSPF GDGTQRLAHC  420
LADGLEARLA GTGSQIYKAL VSKRTSAADF LKAHHLYLAA SPFKKISNFV SNKTIMNLAQ  480
NATRVHVIDF GILYGFQWPT LIQRISWRDG GPPRLRITGI EFPQPGFRPA ERVEETGHRL  540
AAYAEKFNVP FEYNAIAKNW DTIKLEELKI DRDEVLVVNF LYRGKNLLDE SVAVDSPRNR  600
VLDLIRRINP DLFIHGIVNG AFNAPFFVTR FREALFHFSS LFDMLETVVP REDRERMLIE  660
TEIFGREALN VIACEGWERV ERPETYKQWQ VRNLRAGFVQ LPLDRGLVKR AGEKVRSGYH  720
KDFVIDEDSR WLLQGWKGRT VYALSTWKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein