PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1005380.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 636aa MW: 72019.9 Da PI: 10.1427

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1005380.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.8	4.1e-18	143	229	1	95
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k +++s+v + +l lp kf+e+h +k ++s +++lede+g++++ + +k+ + l++GW++F+ +++L++gD +vF+l++ +f Pd.00g1005380.m01 143 FVKSMVRSHVYSCFWLGLPSKFCEDHLSK-TGS-EMVLEDEDGNEYDAVY--IGKRAG--LSGGWRGFALEHKLDDGDALVFELTEPARF-- 226 89**********************655.444.9***********..555544..9********************9765555.. PP EEE CS B3 93 vvk 95 ++ Pd.00g1005380.m01 227 KIY 229 444 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence
MAAAVDSFTA NTYEEARNQR LEENKRKFQD LGISNISKTL THLTASPNKS QQRVSRPKAK 60 NTCFDLEPRR SSRQRNPIQS YRDDVDIGLP TLRKGSRKTS SSWGSYLARP IEEVRAASYE 120 ERSAAFKAAE KLQENLQTEN PSFVKSMVRS HVYSCFWLGL PSKFCEDHLS KTGSEMVLED 180 EDGNEYDAVY IGKRAGLSGG WRGFALEHKL DDGDALVFEL TEPARFKIYI VKAYPMPSLE 240 CFKNNVDKEE ITSAEKTSKA AMKTDSESNQ KRRSKRGIVL EMDEPQTSPD SEPNQKRRSK 300 RGTVPAMVDT KTSPDSESIQ KRRSERGVVP VMEDSKTSPV LEPNQRRRSK RGMVPEMEDT 360 KTFPDSEPNQ KRRSKRGTVP AMVDTKTSPD SESIQKRRSE RGVVPVMEDS KTSTVLEPNQ 420 RRRSKRGMVP EMEDTKTFPD SEPNQKRRSK RGTVPAMVDT KTSPDSESIQ KRRSERGVVP 480 VMEDSKTSPV LEPNQRRRSK RGMVPVMDDT KTSPDSESNQ KQRSKRGIVP EMDDTKTSPK 540 ALPDSPKGQE IEQEVSPMKK NEVAPKQIRK KAKANRVRST ENPEGCEVQE ASTGSLEGCE 600 VKQEASTTET DSRIVEDEKK CVARKPRKER LFRKRA

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence

MAAAVDSFTA NTYEEARNQR LEENKRKFQD LGISNISKTL THLTASPNKS QQRVSRPKAK  60
NTCFDLEPRR SSRQRNPIQS YRDDVDIGLP TLRKGSRKTS SSWGSYLARP IEEVRAASYE  120
ERSAAFKAAE KLQENLQTEN PSFVKSMVRS HVYSCFWLGL PSKFCEDHLS KTGSEMVLED  180
EDGNEYDAVY IGKRAGLSGG WRGFALEHKL DDGDALVFEL TEPARFKIYI VKAYPMPSLE  240
CFKNNVDKEE ITSAEKTSKA AMKTDSESNQ KRRSKRGIVL EMDEPQTSPD SEPNQKRRSK  300
RGTVPAMVDT KTSPDSESIQ KRRSERGVVP VMEDSKTSPV LEPNQRRRSK RGMVPEMEDT  360
KTFPDSEPNQ KRRSKRGTVP AMVDTKTSPD SESIQKRRSE RGVVPVMEDS KTSTVLEPNQ  420
RRRSKRGMVP EMEDTKTFPD SEPNQKRRSK RGTVPAMVDT KTSPDSESIQ KRRSERGVVP  480
VMEDSKTSPV LEPNQRRRSK RGMVPVMDDT KTSPDSESNQ KQRSKRGIVP EMDDTKTSPK  540
ALPDSPKGQE IEQEVSPMKK NEVAPKQIRK KAKANRVRST ENPEGCEVQE ASTGSLEGCE  600
VKQEASTTET DSRIVEDEKK CVARKPRKER LFRKRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	1e-72	B3 family protein